Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02151 ATGGGTCGCCCACCCAGTAATGGAGTCCCCGCCTTCCGCTTCACTCCCACCGAGGTGACAGAAATGGAAACTATTCTGCAAAATCACAACTATGCAATGCCAGCACGCGATGTACTTACAGCTCTTGCAGAGAAGTTCAGTGAATCACTAGAACGGAAAGGCAAGATTACAGTGCAGATGAAACAGGTCTGGAATTGGTTTCAAAATAAGCGCTATGCTATTAGGGCAAAATCAAGCAAGACACCTGGAAAGTTAAATATCACTCCTATGCCTCGGGATGAATCAACCACAGTAAGGAATATACCTCAACTGACAGCTGGTCCAATTCCTACTACATCAGGTTCAGTTCCAACACCAGGAAAGGTAACTCCAGAAAATTCAGTTATGGAATTTGAAGCTAAATCTGGAAGAGATGGAGCATGGTATGATGTGGCTAGCTTTCTATCACACAGATATCTGGATACAAGTGATCCGGAAGTGCTGGTACGGTTTTCTGGTTTTGGATCCGAGGAAGATGAGTGGATTAATATCCAAAGAAATGTCAGGCCACGTTCCTTGCCATGTGAATCATCAGAATGTGTTGCAGTCCTCCCGGGGGATCTCATTCTTTGTTTTCAGGAAGGTAAAGAGCAAGCCCTTTACTTTGATGCCCATGTGCTTGATGCTCAAAGACGGAGGCATGATGTAAGAGGCTGTCGATGTAGATTTTTGGTTCGATATGATCATGATCAGTCAGAGGAAATTGTCCCGCTCAGAAAGGTCTGTCGCAGACCTGAAACCGATTACAGATTACAGCAACTTCATGCTGCAAATGAAGCCGGAGGAGCTACAGATCAGCAAAAGATTGCCACAAAACCAGTAAATGCGCATGGTATCAGGGTTACTAGTTCTTCTGAAACGGTGCCACGGCAGCAGAATGCAAACATCTCTATGGCACCACCACATGTTTTGCAAATGACAGTTTCGGTAGCGCCCCAAAATCTAGTTGTTGATCCAAAGAAAACTGAAACGATTATTAATGTTCAGGCAGGAAATTCGATTATTGCCCCAGGTAGTGTTGCGCTTACTAGCAGCATTGCTATAAGCAGTGTTCCTGAGGTACCTAGTCAAAACATTTCTGAAGGAAAATAA 1131 0.443 MGRPPSNGVPAFRFTPTEVTEMETILQNHNYAMPARDVLTALAEKFSESLERKGKITVQMKQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDESTTVRNIPQLTAGPIPTTSGSVPTPGKVTPENSVMEFEAKSGRDGAWYDVASFLSHRYLDTSDPEVLVRFSGFGSEEDEWINIQRNVRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLHAANEAGGATDQQKIATKPVNAHGIRVTSSSETVPRQQNANISMAPPHVLQMTVSVAPQNLVVDPKKTETIINVQAGNSIIAPGSVALTSSIAISSVPEVPSQNISEGK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02151 376 MobiDBLite consensus disorder prediction 103 122 - -
Aip03g02151 376 Gene3D - 188 260 - -
Aip03g02151 376 CDD homeodomain 13 75 IPR001356 GO:0003677
Aip03g02151 376 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 334 IPR039276 -
Aip03g02151 376 MobiDBLite consensus disorder prediction 103 123 - -
Aip03g02151 376 Gene3D - 126 187 - -
Aip03g02151 376 Gene3D - 9 83 - -
Aip03g02151 376 Pfam SAWADEE domain 129 255 IPR032001 GO:0003682
Aip03g02151 376 SMART HOX_1 7 81 IPR001356 GO:0003677
Aip03g02151 376 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 334 - -
Aip03g02151 376 SUPERFAMILY Homeodomain-like 12 78 IPR009057 -
Aip03g02151 376 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02151 Aip-Chr3 32105608 32117878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02151 - - aip:107630217 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02151 03 32105608 32117878 Aip03g02151 03 32105608 32117878 ECH