Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02147 ATGAGAGGGAGATCTAAGAGAAGAGGAGGCGGAGGAGGAGAAGCGAGCTTCAGGAGCAGAGGCGAACAAAGCTTTCACGGTGGAGATCTCAACCGACAGAAATCACAAAGAAGCCAGAGCTTACAGCAGGAGTGTTTGTCTCAACGGAACCAACGATGGGTTCATGTTCCTTCAGCAATATGCGAAGCTCTGAGAGCGTTTGGTTCTGAATTCAGCTGCTTCTTCAGTTGCAGGTCTTCTTGCGGAAGGGAAAAACATTCGGCCAAGGCAGAAGAAGAAGGGACAGCAGTTGGAAGTTGGCTGGTGACTCTTCAAGAAGGGAGTGATCCCCATAAGGGAAGGGAGATTGAACTTATAATGGGAGGTAGTGAAGAAGATGAAACCCAAGGAGACAACAATAACAGCCCTGAGAGAAGCAACAGAAGGAGGAGGCACGTGTTTGAAGACATTGACATCGATATAGACAATCTCAAGAGTGAGGAGGAAGAGAAAGCTAGAGTTAGCATATGCATCCCTCCAAAGAATGCTCTGTTGTTGATGAGGTGCAGATCTGACCCTGTCAAAATGGCTGCCCTCGCTAACAGGTTTTGGGAGCCAAGTGTTCAGGCAACACAAGAAGATAGAGAAGCTGAAGAGGCCCAAGTGCAAATGGAAGAGGACTCTAACAAGGAAGTGGAAAACAATTACAATGTTGCGATTCATGATGAGAGTGGAAAAAGTACACTTGCTTTTGTTAGTAAAGAAGAAACAGAGGCAGCAAATAATGAAGGCAATCAAGTGGTTATCGAAGAAGCGAAAGGAGATGTTGAAAAAGAAGAGGAAGCTATTGGAGAAGTGACTAATTATGGTGAGGAAAACGACGTCGCACAGAGATCTGAGCTTTCTTCAACTACTGCACACTCTGCACCTTCAGTGAAAATGACTTCAGAGGAGAAACCCATGGAAGAAGAAAATAGGTCAAAGGAGAGAGAAAGTGGAGCATTACCAGAATGCTTGCTTTTGATGATGTGCGAACCGAAGCTGTCAATGGAGGTTTCCAGGGAGACGTGGATCTGCACCGCCGACTTCGTACGGTGGCTGCCGCCGAGGCCAGCGGCGAAATCCAGTGGAGGAGATCGTCAACACAAGAAGCGGATGGCCGCCGTGGACAACAAGCCGCCGCCTCCGCCGACGGCGGCTGTTCAGCCGCAGCAGGTGCAACCGGGGAGGTCATCGTTCTCGTTTCCGGCCGCCGCCGTGGCGTCGGCGGTAGGGACAAATGCAGGAGAAGGTTCGGCTCTAAAGCGGTGCAAGTCGGAGCCGAGAAGGTCAGCGGCTAAGCTAGCTCCGGAAGCGTGTTCATGGAACAATAGGAAGCTGACGGAGCCACCTCCTCCGGCACCGGTTGGAGTTGGCGGCGCAGCGGGGGTTGGATTTTGA 1419 0.506 MRGRSKRRGGGGGEASFRSRGEQSFHGGDLNRQKSQRSQSLQQECLSQRNQRWVHVPSAICEALRAFGSEFSCFFSCRSSCGREKHSAKAEEEGTAVGSWLVTLQEGSDPHKGREIELIMGGSEEDETQGDNNNSPERSNRRRRHVFEDIDIDIDNLKSEEEEKARVSICIPPKNALLLMRCRSDPVKMAALANRFWEPSVQATQEDREAEEAQVQMEEDSNKEVENNYNVAIHDESGKSTLAFVSKEETEAANNEGNQVVIEEAKGDVEKEEEAIGEVTNYGEENDVAQRSELSSTTAHSAPSVKMTSEEKPMEEENRSKERESGALPECLLLMMCEPKLSMEVSRETWICTADFVRWLPPRPAAKSSGGDRQHKKRMAAVDNKPPPPPTAAVQPQQVQPGRSSFSFPAAAVASAVGTNAGEGSALKRCKSEPRRSAAKLAPEACSWNNRKLTEPPPPAPVGVGGAAGVGF 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02147 472 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 2 286 - -
Aip03g02147 472 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 271 472 - -
Aip03g02147 472 MobiDBLite consensus disorder prediction 309 325 - -
Aip03g02147 472 Coils Coil 201 228 - -
Aip03g02147 472 MobiDBLite consensus disorder prediction 361 472 - -
Aip03g02147 472 MobiDBLite consensus disorder prediction 277 325 - -
Aip03g02147 472 MobiDBLite consensus disorder prediction 26 43 - -
Aip03g02147 472 MobiDBLite consensus disorder prediction 1 43 - -
Aip03g02147 472 MobiDBLite consensus disorder prediction 285 305 - -
Aip03g02147 472 PANTHER CHLOROPLAST PROTEIN HCF243 271 472 - -
Aip03g02147 472 PANTHER CHLOROPLAST PROTEIN HCF243 2 286 - -
Aip03g02147 472 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02147 Aip-Chr3 32049560 32051773 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02147 - - ahf:112733442 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02147 03 32049560 32051773 Aip03g02147 03 32049560 32051773 ECH