Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02111 ATGGCCTTTTGCCCATTGCCTTCGTCTTCTTCTTCTTCCTCTGATTCTTCATCCTCGTCTTCCTCGCCGTTTGAGTCTTTCAACAGCGCAAAGTTCTGGATCCTCCATGGCATTATGGCCGGAGTTGCAGTTGCTGCTGCGGTCGGTGCTCGCGCCTACTGGACTCGGGTCAAGAAATTCCGGAACCAGGTCGTCGGCATCATACCCGCCCGATTTGCTTCTACCCGGTTTCAGGGAAAGCCTCTCGTTGAGATTCTTGGTAAACCTATGATCCAGAGGACATGGGAAAGGGCAAAGCTGGCAGCCACGTTGGATCAAGTTGTTGTGGCAACTGATGATGAAAAGATTGCTGAGTGCTGTCGAAAGTTTGGAGCTGATGTTGTAATGACATCTGAGTCTTGTCGAAATGGTACTGAGCGCTGCAGTGAAGCCCTAGAGAAGCTTGGTAAAAACTATGATATTGTTGTCAACATTCAGGGTGATGAACCTCTTATTGAACCTGAAATAATTGATGGCATTGTCAAAGCTTTGCAGGCAACTCCAGATGCGGTGTTCAGTACTGCAGTCACATCTTTAAAGCCAGAAGATGCACTTGATCCGAATAGAGTGAAATGTGTCGTAGATAATCGTGGTTATGCTATCTATTTTTCACGAGGATTGATCCCATTCAACAAGTCGGGAAAGGTCAATCAACAGTTTCCTTATTTGCTTCATCTGGGGATACAGAGCTATGATACAAAGTTTCTGAAGATATATCCAGATCTTCAGCCTACTCCATTGCAACTGGAGGAAGATTTGGAACAGCTTAAAGTCCTCGAGAACGGCTATAAGATGAAGGTAATAAAAGTTAACCACGAGGCCCATGGTGTTGACATTCCAGAAGATGTTCAAAAGATAGAATCTCTAATGCGTGAGAGGAACTTGTCTTGA 930 0.4527 MAFCPLPSSSSSSSDSSSSSSSPFESFNSAKFWILHGIMAGVAVAAAVGARAYWTRVKKFRNQVVGIIPARFASTRFQGKPLVEILGKPMIQRTWERAKLAATLDQVVVATDDEKIAECCRKFGADVVMTSESCRNGTERCSEALEKLGKNYDIVVNIQGDEPLIEPEIIDGIVKALQATPDAVFSTAVTSLKPEDALDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNQQFPYLLHLGIQSYDTKFLKIYPDLQPTPLQLEEDLEQLKVLENGYKMKVIKVNHEAHGVDIPEDVQKIESLMRERNLS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02111 309 CDD CMP-KDO-Synthetase 63 302 IPR004528 GO:0008690
Aip03g02111 309 PANTHER BNAA05G35640D PROTEIN 26 309 - -
Aip03g02111 309 TIGRFAM kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 66 297 IPR004528 GO:0008690
Aip03g02111 309 MobiDBLite consensus disorder prediction 1 21 - -
Aip03g02111 309 Hamap 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 62 304 IPR004528 GO:0008690
Aip03g02111 309 Coils Coil 299 309 - -
Aip03g02111 309 Pfam Cytidylyltransferase 66 276 IPR003329 -
Aip03g02111 309 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 54 304 IPR029044 -
Aip03g02111 309 SUPERFAMILY Nucleotide-diphospho-sugar transferases 64 306 IPR029044 -
Aip03g02111 309 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 26 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02111 Aip-Chr3 31031291 31038816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02111 K00979 - gmx:100800647 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02111 03 31031291 31038816 Aip03g02111 03 31031291 31038816 ECH