Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02055 ATGGCAAAGAAGTTGGAAAAGATGGCATCCATTGATGCCCAACTTAGGCAGCTGGTTCCGGCAAAAGTGAGCGAAGATGACAAACTGATTGAGTATGATGCTCTGCTATTGGATCGCTTCCTTGATATTCTTCAGGACTTACACGGAGAGGATCTGAAAGAAACGGTTCAAGAAGTATACGAGCTTTCTGCTGAATATGAAGGGAAACACGACTCTAAGAAACTGGACGAACTTGGAAATCTGATAACTAGTTTGGATGCTGGTGATTCAATTGTCGTCGCCAAATCCTTTTCTCATATGCTTAACTTGGCCAACTTAGCAGAAGAGGTCCAGATTGCTCATCGGCGAAGGATCAAGTTGAAAAAGGGAGATTTTGCTGATGAGAACAATGCAACTACTGAATCAGACATTGAAGAAACACTCAAGAAGCTTGTAGTGGAATTAAAAAAGTCTCCTCAGGAAGTTTTTGAAGCACTGAAAAACCAGACCGTTGATTTGGTTCTTACAGCTCACCCTACTCAATCTGTTCGTAGATCTTTGCTTCAGAAGCATGGAAGGATACGAAACTGTTTAACTCAATTATATGCCAAAGATGTAACTCCTGATGACAAGCAGGAACTTGATGAGGCTCTACAGAGGGAGATCCAAGCTGCCTTCCGTACTGATGAAATTAGGAGGACTCCTCCAACCCCGCAAGATGAGATGAGAGCAGGGATGAGCTACTTCCATGAGACAATTTGGACTGGTGTACCCAAATTTCTACGTCGGCTGGATACAGCTTTGAAGAATATAGGGATAAATGAACGTGTCCCTTATAATGCTCCTCTTATTCAATTTTCTTCTTGGATGGGTGGTGATCGTGATGGCAATCCAAGAGTAACTCCTGAAGTGACAAGGGATGTTTGTTTATTGGCTAGAATGATGGCTGCTAATTTATATTATTCCCAGATAGAAGATCTTATGTTTGAACTGTCAATGTGGCGTTGCAATGATGAGCTGCGTGTACGTGCAGATGAACTTAACAGATCTTCCAGGAAAGATGCAGTTGCTAAGCACTATATAGAGTTTTGGAAAATCATTCCCCCAAATGAACCATACCGTGTGTTACTGGGCGAAGTAAGGGATAGGCTTTATCAGACTCGTGAGCGATCTCGCCATTTGCTAGCACACGGGCACTCTGAAATTCCAGAGGAAGAAACTTTTACCAATGTTGAGGAGTTCTTGGAACCCCTGGAACTTTGCTATAGATCACTCTGTGCTTGTGGTGATCGGGCAATTGCCGATGGAAGCCTTCTAGATTTCCTTCGGCAAGTCTCTACTTTTGGATTGTCACTAGTGAGGCTTGATATCAGGCAAGAGTCAGACCGTCATACTGATGTGTTGGATGCCATTACCAAGCATCTGGAAATTGGTTCCTACCAGGAATGGTCAGAAGAGAAACGGCAGCAATGGCTTTTGTCTGAATTGAGTGGCAAACGGCCACTGTTTGGGCGCGACCTTCCCAAAACTGAAGAAATTAAAGATGTTTTGGACACATTTCATGTTATTGCTGAACTGCCAGCAGATAACTTTGGAGCATATATCATATCAATGGCAACTGCACCATCTGATGTGCTTGCAGTTGAACTTCTGCAACGTGAATGCCATGTCAAGCATCCACTAAGAGTTGTCCCATTGTTTGAGAAACTTGCAGATCTGGAGGCAGCTCCTGCTGCTTTGGCTCGGTTGTTCTCCATAGACTGGTACAGAAACCGAATCAACGGAAAGCAAGAAGTTATGATTGGTTATTCTGATTCAGGTAAAGATGCTGGAAGGTTCTCTGCAGCATGGCAGCTATATAAGGCCCAAGAGGAACTTATCAAGGTAGCTAAAGAGTATGGTGTTAAGCTAACAATGTTCCATGGTCGCGGTGGAACTGTTGGGAGAGGAGGTGGTCCAACCCACCTTGCTATCTTATCCCAACCTCCGGATACAATCCATGGGTCACTTCGTGTAACTGTCCAAGGTGAAGTTATTGAACAATCATTTGGAGAGCAGCACTTATGTTTCCGAACACTTCAACGTTACACTGCTGCAACTCTAGAACACGGAATGCATCCTCCAATCTCACCCAAACCAGAGTGGCGGGCTTTGATGGATCAGATGGCTGTCATTGCTACAGAGGAATACCGCTCTATTGTATTCAAAGAACCTCGATTTGTTGAGTACTTCCGTCTGGCTACACCAGAGTTGGAGTATGGCCGCATGAACATAGGAAGTCGACCAGCAAAGCGAAAGCCAAGTGGAGGCATTGAGACTCTCCGTGCAATACCTTGGATATTTGCCTGGACACAAACAAGGTTTCATCTTCCGGTGTGGCTAGGCTTCGGGGAAGCATTTAGACATGTTATTGGGAAGGATATTAAGAATCTTCATATGCTGCAAGAAATGTACAATCAGTGGCCTTTCTTCAGGGTCACTCTTGATTTAGTGGAAATGGTGTTTGCCAAGGGAGACCCTGGCATAGCTGCCCTGTATGATAAGCTCCTTGTTTCACAAGATCTATGGTCGTTTGGGGAGCAGTTGAGGACCAAGTTTGACGAAACCAAGAAACTCCTGCTTCAGGTGTGTGGACACAGAGATCTTCTTGAAGGGGATCCATACTTAAAACAAAGGCTCCGCTTGCGTGATTCTTACATTACCACCCTGAACGTTTGCCAAGCTTACACATTGAAACGTATCCGTGATCCGAACTACAATGTGAATTTGCGACCGCACATCTCAAAAGAGTATATAGAGATAAGTAAACCTGCTGATGAACTTATAACACTGAACCCAACAAGTGAATATGCTCCTGGTTTGGAAGACACCCTCATCCTCACCATGAAGGGTATTGCTGCTGGCATGCAGAACACTGGTTAA 2901 0.4433 MAKKLEKMASIDAQLRQLVPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEVYELSAEYEGKHDSKKLDELGNLITSLDAGDSIVVAKSFSHMLNLANLAEEVQIAHRRRIKLKKGDFADENNATTESDIEETLKKLVVELKKSPQEVFEALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDVTPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWTGVPKFLRRLDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRADELNRSSRKDAVAKHYIEFWKIIPPNEPYRVLLGEVRDRLYQTRERSRHLLAHGHSEIPEEETFTNVEEFLEPLELCYRSLCACGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITKHLEIGSYQEWSEEKRQQWLLSELSGKRPLFGRDLPKTEEIKDVLDTFHVIAELPADNFGAYIISMATAPSDVLAVELLQRECHVKHPLRVVPLFEKLADLEAAPAALARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKEYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEQHLCFRTLQRYTAATLEHGMHPPISPKPEWRALMDQMAVIATEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRKPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGEAFRHVIGKDIKNLHMLQEMYNQWPFFRVTLDLVEMVFAKGDPGIAALYDKLLVSQDLWSFGEQLRTKFDETKKLLLQVCGHRDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPNYNVNLRPHISKEYIEISKPADELITLNPTSEYAPGLEDTLILTMKGIAAGMQNTG 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02055 966 Pfam Phosphoenolpyruvate carboxylase 34 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip03g02055 966 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 32 966 IPR015813 GO:0003824
Aip03g02055 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 592 604 IPR033129 -
Aip03g02055 966 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 966 - -
Aip03g02055 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 167 178 IPR018129 -
Aip03g02055 966 Gene3D Phosphoenolpyruvate/pyruvate domain 307 444 - -
Aip03g02055 966 PRINTS Phosphoenolpyruvate carboxylase signature 166 179 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip03g02055 966 PRINTS Phosphoenolpyruvate carboxylase signature 219 235 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip03g02055 966 PRINTS Phosphoenolpyruvate carboxylase signature 279 294 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip03g02055 966 PRINTS Phosphoenolpyruvate carboxylase signature 441 461 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip03g02055 966 PRINTS Phosphoenolpyruvate carboxylase signature 590 610 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip03g02055 966 PRINTS Phosphoenolpyruvate carboxylase signature 632 661 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip03g02055 966 PRINTS Phosphoenolpyruvate carboxylase signature 764 790 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip03g02055 966 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip03g02055 966 Hamap Phosphoenolpyruvate carboxylase [ppc]. 22 966 IPR022805 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02055 Aip-Chr3 29503205 29511075 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02055 K01595 - gmx:100820574 1815.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02055 03 29503205 29511075 Aip03g02055 03 29503205 29511075 ECH