Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02032 ATGCTCCTTCAGCTTAATCTTCTTCATCTTCCTTACTACCACCAACCTTCCCTTCCGAACTCGATAATCCTTAAACTCCTCACTCCACCAATTTCTTCTCTTCCTCAATCCTTCCCTCGAACCGGTTCCGGTCGGCGAGCGAGTCTTTCGGCTTGCCACAGTTTGGGTTCACCGGTTTTCTCGTTGCCGGAGGATGAGTTGGACGTGGAGCTGGGTCGGCTTCTGGCGCTGTTGCCGGAGGAGATGCGGCGGCGGGTCAGTGATCACCCGGAGCTGCACCAGCTGATGGAGGTGGTCATGGATTTGGGTCGGAAACCACTGGCTAGGTTTCCGTCCGGTGATTTCGTGATTTCGGAGTTTCCAATAACGGTTCAGGATATCGAGCACGCTACGGCACAGGTTGGTGATTTTGCTATTGATAATCGAGCTGGAATCAGTAGGACTTTACACCGGATTAGTGCTATCAGAAACCGTAAGGGGGCAATCATTGGCCTAACTTGTCGAGTTGGCAGGGCAATTTCTGGGAGTGCTAAATTGTTGCAAGATTTGGTTCAAGATGGGGCTTCTTTGTTGCTTATTGGGCCTCCTGGAGTAGGAAAAACTACAATTATTAGGGAAATAGCTCGGATGTTAGCAAATGATTATAAGAAGCGTGTGATGATAGTTGACACCTCCAATGAGATTGGTGGTGATGGGGATATACCACATGCTGGAATAGGCAGTGCTCGACGTATGCAAGTCCCCAACGCTGATATGCAACATAAGGTATTAATAGAAGCAGTTGAAAACCACATGCCACAAGTGATTGTAATAGATGAAATTGGTACAAAACTTGAAGCAATGGCTGCTAGTACTATCGCACAGCGTGGAATCCAGCTTGTTGCCACTGCTCATGGAGTCACAATTGAGAACCTAATAATGAATCCTTCATTAGAGATGCTAGTCGGAGGAGTACAGAGTGTGACACTGGGGGATGAAGAGGCCAGTCGCAGGGGTGTCCAGAAGACTGTGTTAGAGAGGAAAGGGCCATCAACATTTAGTTCTGGAGTGGAAATTATCTCCAAGACACAGCTGAGGATTCATCGTAGCCTTGAAGCAACTGTTGATGCTATTCTTTCTGGTCGTCTTCCAAATGTTGAAGTGCGCAAAATGAAATCTCAAGAACAAGAGAATTCACCCAAGGGACCTGTTATTAACAGTTCTCCTAATGGCAACGTTATGTATGAAGATGCAGTAGAGCAGGCTGATGACCAAAATGATCAAAATGTATCTCCTTCTCAGTTGCCTAATGATGTGGTAGAGGATTCATGGGAACACAAAGTGCCACTTCGCCTGTTTTGTTATGGGATTTTAGAGGCCACTGTTATGCAAGGGGTCAAACAGTTGAAAATGAATGATGCAGCCCTTCAATTGACTGATAATATTAGTGAGGCACATGCCTTACTTGCCTTGCAAGCAAAGCTTAAAAAGAATCCAAGGATCCAAGCTGCTGCTAAATCTCATGATATTCCTATATATGTAACAAAGACAAGTTCATTGGAGCAAGTAACAAAAGCCATACAGGCATTAGTAGATGATCATGAAAATGGTTTAAAGGATTCTGTATCAATGGATAAGATTAAACTATCGGAGAAGATTGATGCTTTGGAGGAGGCAAGAATGGCTATCGAACATACTGTAATTCCTAAGGGAGAACCTGTGGATCTACTTCCAAGGACATCTCACATACTGTCACTTCAGCTGGACCTCATTCGTAAATACCAACTAGAAGCAAGGAGAATCGCTGGAGAGTCAGATGTACATTTGCGCATCCTTCCATCCCATTATATGACAGATGAAGAAGCAAAAACTGATGAAATATCTGAGTTTGATGATTTTGCTTCCAATGGCAGCGCCAATGGCTCACCATACAGCTTGGACAGATTGCCCCTTCTGCCTGAGTAA 1944 0.4491 MLLQLNLLHLPYYHQPSLPNSIILKLLTPPISSLPQSFPRTGSGRRASLSACHSLGSPVFSLPEDELDVELGRLLALLPEEMRRRVSDHPELHQLMEVVMDLGRKPLARFPSGDFVISEFPITVQDIEHATAQVGDFAIDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAISGSAKLLQDLVQDGASLLLIGPPGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGSARRMQVPNADMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGVQSVTLGDEEASRRGVQKTVLERKGPSTFSSGVEIISKTQLRIHRSLEATVDAILSGRLPNVEVRKMKSQEQENSPKGPVINSSPNGNVMYEDAVEQADDQNDQNVSPSQLPNDVVEDSWEHKVPLRLFCYGILEATVMQGVKQLKMNDAALQLTDNISEAHALLALQAKLKKNPRIQAAAKSHDIPIYVTKTSSLEQVTKAIQALVDDHENGLKDSVSMDKIKLSEKIDALEEARMAIEHTVIPKGEPVDLLPRTSHILSLQLDLIRKYQLEARRIAGESDVHLRILPSHYMTDEEAKTDEISEFDDFASNGSANGSPYSLDRLPLLPE 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02032 647 SMART AAA_5 186 317 IPR003593 -
Aip03g02032 647 Pfam Sporulation stage III, protein AA 165 316 IPR045735 -
Aip03g02032 647 MobiDBLite consensus disorder prediction 383 405 - -
Aip03g02032 647 PANTHER KINASE-RELATED 64 609 - -
Aip03g02032 647 MobiDBLite consensus disorder prediction 390 405 - -
Aip03g02032 647 CDD AAA 187 276 - -
Aip03g02032 647 Gene3D - 168 331 IPR027417 -
Aip03g02032 647 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 194 213 - -
Aip03g02032 647 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 551 569 - -
Aip03g02032 647 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 64 609 - -
Aip03g02032 647 Coils Coil 539 559 - -
Aip03g02032 647 CDD R3H_AAA 547 606 IPR034081 -
Aip03g02032 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 329 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02032 Aip-Chr3 29139266 29150445 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02032 - - gmx:100807394 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02032 03 29139266 29150445 Aip03g02032 03 29139266 29150445 ECH