Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02005 ATGCCAAGCAAGTCGGTTGCCAGTAAACGGTCATTTCGGGGCTTGGGGTTCTGCGACAATGCACGTGCTTTTCAAGGAGTCACATCTGTTGATGTTGAAAGTGCATTTAATGCTTTTGGGATGAATTTTACCGTCTTTCCCTGGGTCCTTTTGCATTCGCACTTGATGGGGTGCTTCTTAAGCTTACAGAAGTGGCGGTGTCCCAATTCTATAGATATGGTACGGAGTAGCGCCGAACCTCAACAAGGGATCGTTTTTGCGGTACGTGGGGTTCCCTTAAAGTATTTTTGGTGCAATACCGATGTGCTGGGAACCCCTTCTCACCTTAGCGAAGACGATTTACAGGACTTTCATGATATCGACGCGATCTGCAGTGAGGGTAACGCCGAGGAAAATTATGAGCTATCTCTTCTCGACCCTCAAGAGCAGTCTTCTCCTTTTGCAGTTGACATGGCTAGCGGGCTTACAACTATGGAGAGCCTTATGGCTACCTTCCTCGAAGTGGAGGATGAGGAGAAGCCTCAGGCTGAGGTGGTCCCGACTTTTGGTGCTGGCGAGGGATCAAGGGAGGCCGATCTGACGACCACCCGGTCAGAAACGGAGATAGCTGAGACTGCGAAGGCTAAGGCTAAGAAGGCGGCTCAAGAAGCTGCTGATGAGATCCAACGCCTCTCCGATCTGGAGATGGCTTTAAGGTTGGAGGCCTTAAAGGTGGTACACCGGGCAGAGGAGGTAGAAAAGAAAATGAAAGCTGCCGAAGATGTTGTGGACGTCTTGAGGAAGAGGAACAAAGAGATCGTGAGAAACCTGAAGGAGGCCATCTCTGCTTCCAAAGGGTCTCTCAAGTTGCAGATATCCTTACTTTTCCTGACTTTGTATGCTTCGAACGTATGCCCGAGGGGCCGAACACGGATGCTTTGcgttcgTTACTTACAGAACGCAAATTGCTATTGTGAAAGTGATTCGGGTTGGTCCTCTCGCGTCGTCTTCTGGAATTATCAGACCCCGTCCCACCGAAAGGTCGCAAGCCGGTTTCGAGATTCGAGTTCTAGTTGTTCCGTGGCTGGTGACTGGGTGTCACTGCCGTGTGGACCATGCTCAGAACTCGGACCCTATTTGGTGCATGATTTTCCAAGAGCACGGCGCCAATATTCAAGACTGACATGGAACGATGAGATCTATGACCTAATGCGGTTGATGAGCTTCACGGCTTTTGGGTCCTTGGACGAAGGTAGGGGAAGGACCTGCAAAGATATTCCGACACCGAAGTCAAAGTCGATCTTAGAGATTGAGGTTATGGTTTTTTGCAATGTTAGATTCATCTCTGTAATCGGATCTCAATTAGTGATCTCCGTTGAGTTGTCCGAGATACTGAGGCCAAAAAGGAGAATTGGGCTTAATTCTCGTTGGGCCGTGGAGCCGTTAGGGCTGTCAGGCGAGTCCACAACAGCAAACTTTTTCAATTGGCTAGCTGCTTTCTCACTTGTCGATGCATATTGCTTGTTGAAAGAAACTCGCACCTGCGTGCAGCGCAGGAGCCCGTGCTTTCTAAAGCGTATAGCATGCCCGCCTGAGTGCCCTTTTACGTCGCCAAAGGATCCAAAAGCCAAAGTCTGCTACATTGACTGTGAATCTCCCATATGCAAAGCTCAGTGCAAAACTCGCAAACCGAATTGTAATGGTCGAGGATCGGCATGCTTGGATCCTCGTTTTGTCGGTGCAGATGGAATTGTTTTCTACTTCCATGGAAGGCGGGATGAGCATTTCAGCTTAGTGTCTGATGAGAACCTTCAGGTCAATGCACGTTTCATTGGCCTTAGGCCAGAAGGAAGGAAAAGGGATTATACTTGGATTCAAGCATTGGGAATCCTATTTGAATTCCACAACTTCTCTATCGAGGCCACCCGATCAGCAATTTGGGACAAAGAAGTCGACCACTTGAAACTCTCATACAACGGAGAGGAGCTCGTGATCCCAGAAGGTCACCTCTCCACATGGCAGTCCACAGAGAATCAGCTTAAAGTGGAGAGAACATCAAGCAAAAACAGTGTCATGGTTACTCTACCAGAAGTTGCCGAGATATCAGTCAACGTGGTACCTGTAACCAAGGAAGATAGTAGAATCCACAACTATCAAATCCCTGATGATGATTGCTTTGCTCACTTGGAGGTTCAGTTCAAATTCTACGGCCTGTCCCACAAAGTTGAAGGAGTTCTTGGCAGGACTTATCAGCCTGATTTCAAGAATCCGGCAAAGCCAGGTGTAGCAATGGCAGTTGTTGGAGGAGAAGACAGGTATAGAACCTCATCGCTTCTTTCTCCAGATTGTGGTGCTTGTGTATTTTCTCCAAAACAGCCTTCAGAAAGGAAGACCTCTGTGCTGGAGTATGGTTTGCTGGATTGCACTGGTGTTGCAAAAAGTGGGAATGGTATAGTTTGCAGGAGATAA 2448 0.4812 MPSKSVASKRSFRGLGFCDNARAFQGVTSVDVESAFNAFGMNFTVFPWVLLHSHLMGCFLSLQKWRCPNSIDMVRSSAEPQQGIVFAVRGVPLKYFWCNTDVLGTPSHLSEDDLQDFHDIDAICSEGNAEENYELSLLDPQEQSSPFAVDMASGLTTMESLMATFLEVEDEEKPQAEVVPTFGAGEGSREADLTTTRSETEIAETAKAKAKKAAQEAADEIQRLSDLEMALRLEALKVVHRAEEVEKKMKAAEDVVDVLRKRNKEIVRNLKEAISASKGSLKLQISLLFLTLYASNVCPRGRTRMLCVRYLQNANCYCESDSGWSSRVVFWNYQTPSHRKVASRFRDSSSSCSVAGDWVSLPCGPCSELGPYLVHDFPRARRQYSRLTWNDEIYDLMRLMSFTAFGSLDEGRGRTCKDIPTPKSKSILEIEVMVFCNVRFISVIGSQLVISVELSEILRPKRRIGLNSRWAVEPLGLSGESTTANFFNWLAAFSLVDAYCLLKETRTCVQRRSPCFLKRIACPPECPFTSPKDPKAKVCYIDCESPICKAQCKTRKPNCNGRGSACLDPRFVGADGIVFYFHGRRDEHFSLVSDENLQVNARFIGLRPEGRKRDYTWIQALGILFEFHNFSIEATRSAIWDKEVDHLKLSYNGEELVIPEGHLSTWQSTENQLKVERTSSKNSVMVTLPEVAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLEVQFKFYGLSHKVEGVLGRTYQPDFKNPAKPGVAMAVVGGEDRYRTSSLLSPDCGACVFSPKQPSERKTSVLEYGLLDCTGVAKSGNGIVCRR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02005 815 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-LIKE PROTEIN 496 815 - -
Aip03g02005 815 Coils Coil 203 234 - -
Aip03g02005 815 Pfam Root cap 725 781 IPR009646 -
Aip03g02005 815 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 496 815 - -
Aip03g02005 815 Coils Coil 242 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02005 Aip-Chr3 28429475 28442788 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02005 - - lang:109353708 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02005 03 28429475 28442788 Aip03g02005 03 28429475 28442788 ECH