Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01987 ATGAAGGATTTTTCCATTCCGGATTACATACTCGTCCCCGGAGCAAAGATTCGCAATGATTATTACATACCAGAATGCCCTTTGATAGTTTTCATAAACTCCAAAAGTGGTGGTCAGCTTGGTGGCGAGCTTCTTACTACCTACAATTCCCTCCTCAACAAAAATCAGGTTTTTGATTTGGGATCAAATGCTCCCGATATGGTGCTGCATCGGATTTATTCCAAGTTAGAAAAGTTAAAGCACAATGGAGATACTTTTGCTGCTGAAATTCAAAAAAGATTGAGAATAATTGTTGCAGGTGGAGATGGTACGGCGAGCTGGATTATCGGAGTTGTCGCCGATCTTAAGTTGCATCGGCCACCACCAGTTGCAACAATGCCATTGGGAACCGGAAACAATATCCCCTTTTCATTTGGATGGGGAAGGAAAAATCCTGGTACTGACAAAGAAGCTGTTATGTCATTCCTGAATCAAGTAAAAGATGCAAAGGAACTGAAAATAGACAGCTGGCATGTTATAATGAGAATGAAGACTCCAAAAGAAGGTTCTTGCGAGCATATTGCGCCTGTTGAGCTGCCGCATGCTCTGCATACATGTCATCCTGTCTCTCCAACAGATAAACTAAACTTGGAGGGTTATCACACTTACCGTGGGGGATTTTGGAATTATTTTAGCATTGGAATGGATGCTCAAGTATCATATAAATTTCATTCTGAAAGGAAGTTGCATCCTGAAAGGTTTAAACATCAGTTATATAATCAGAGTTGCTATTTGAGGCTTGGTTGTACACAAGGATGGTTCTTCGCTCCTCTGAAATCTTCGGCATGGAAAATTGCTCAGCTGGCAACGGTTAAGATAATGAAAAAGCATGGTCAGTGGGAAGATCTAAATATACCACAAAGCACACGGTCAATTGTTTGCCTTAACTTGCCCAGTTTTGCTGGTGGACTAAATCCTTGGGGGACACCAAACAGAAAGAAATCAATTAACAGGGACCTTACTAATCCTTATGTGGATGATGGCTTATTTGAGGTGGTTGGTTTTAGAGACGCATGGCATGGTCTTCTTTTGCTTGCACCAAAGGGGCATGGGACTCGTTTGGCACAGACGAGTAGAATCCGTTTCGAGTTTCATAAGGGTGAAGCGGACTTCACATTCATGAGGATTGATGGAGAGCCATGGAAACAACCCATCCCTAAGGATGATGATGGCAGAGTAGTTGTTGAAATATCTCACCATGGACAAGTGACGATGCTTGCCACCTCATCATGCCAATGTAAAAGTATGCATGATCCCTCCTCCTCCTCCACACCTGCTACAAGCCAAGGAGAAGAAGAATTTAGCACCACCGATGACTCTTCATCAGAAAACTCCGAACAGCGACGCAAGTTTGGTGCAGCTGACACATTTAAATATACCGATGCCATTCAATCGCTTAAGTTAGATTAG 1449 0.4265 MKDFSIPDYILVPGAKIRNDYYIPECPLIVFINSKSGGQLGGELLTTYNSLLNKNQVFDLGSNAPDMVLHRIYSKLEKLKHNGDTFAAEIQKRLRIIVAGGDGTASWIIGVVADLKLHRPPPVATMPLGTGNNIPFSFGWGRKNPGTDKEAVMSFLNQVKDAKELKIDSWHVIMRMKTPKEGSCEHIAPVELPHALHTCHPVSPTDKLNLEGYHTYRGGFWNYFSIGMDAQVSYKFHSERKLHPERFKHQLYNQSCYLRLGCTQGWFFAPLKSSAWKIAQLATVKIMKKHGQWEDLNIPQSTRSIVCLNLPSFAGGLNPWGTPNRKKSINRDLTNPYVDDGLFEVVGFRDAWHGLLLLAPKGHGTRLAQTSRIRFEFHKGEADFTFMRIDGEPWKQPIPKDDDGRVVVEISHHGQVTMLATSSCQCKSMHDPSSSSTPATSQGEEEFSTTDDSSSENSEQRRKFGAADTFKYTDAIQSLKLD 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01987 482 Gene3D - 26 169 IPR017438 -
Aip03g01987 482 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 26 397 IPR016064 -
Aip03g01987 482 MobiDBLite consensus disorder prediction 426 448 - -
Aip03g01987 482 SMART dagk_c4b_2 222 393 IPR000756 GO:0004143|GO:0007205
Aip03g01987 482 SMART dagk_c4a_7 27 170 IPR001206 GO:0016301
Aip03g01987 482 Gene3D - 219 398 - -
Aip03g01987 482 PANTHER DIACYLGLYCEROL KINASE 2 480 IPR037607 GO:0004143|GO:0007165
Aip03g01987 482 PANTHER DIACYLGLYCEROL KINASE 2 480 - -
Aip03g01987 482 Pfam Diacylglycerol kinase accessory domain 220 393 IPR000756 GO:0004143|GO:0007205
Aip03g01987 482 MobiDBLite consensus disorder prediction 426 467 - -
Aip03g01987 482 Pfam Diacylglycerol kinase catalytic domain 27 153 IPR001206 GO:0016301
Aip03g01987 482 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 23 176 IPR001206 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01987 Aip-Chr3 27983938 27989409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01987 1 474 Acyl Lipid Metabolism Gene Families AT2G20900 65.553 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01987 K00901 - gmx:100801004 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01987 03 27983938 27989409 Aip03g01987 03 27983938 27989409 ECH