Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01962 ATGCCTGAGGCTCCCAAAGACTACAACCTCGTAGAACAGAACAGGAAGATCCTCGAGTTCATCGAGGATGTGACTTCCAACGCCGACCAAGTCCAACAGAAGGTCCTCTCCGAAATCCTCTCCCGCAATGCAAACGTGGAGTACCTCCGACGACACGGCCTCAACGGCCAAACTGACCGCGACACCTTCAAAAAACTACTCCCTGTCATTTCCTACGAGGACCTCCAGCCCGATATCAATCGTATCGCCAATGGCGATACCTCCCCAATTCTTTGCTCTAAGCCCATTTCAGAGTTCCTCACAAGTTCTGGAACATCGGGTGGTGAGAGGAAGCTGATGCCTACAATTGAAGAAGAACTGGGAAGGAGGAGCTTGCTGTATAGCTTACTGATGCCGGTTATGAGCCAGTTTGTTCCTGGCTTAGAAAACGGCAAAGGAATGTACTTAATGTTCATAAAAGCCGAGGCCAAAACACCCTCAGGGATCGTGGCTCGTCCCGTTTTAACCAGCTACTACAAGAGCTCATACTTCAGGGACAGACCTTATGACCCGTACACAAACTACACCAGCCCAAACGAGACCGTACTCTGTCCAGACTCTTACCAGAGTATGTATTCTCAATTGCTCTGTGGCCTTTGCCAGAACAAAGAGGTGCTCCGAGTGGGAGCGGTTTTCGCCTCCGGCTTCATCCGGGCGATTCGCTTCCTGGAGAAGCATTGGACCCTTCTTTGCAATGACATAAGAACAGGAAGCGTGAACGGCGAGATCACGGACGTTTCGGTCCGCGAGGCGGTTATGAAGATCCTGAAACCCGACCCGAAGTTGGCGGATTTCATCGAGGCGGAGTGCGGGAAGAAATCTTGGCAGGGAATCATCACTAGGCTGTGGCCCAACACAAAGTATGTGGATGTTATTGTGACTGGGACAATGTCACAGTACATTCCCACATTGGATTACTATAGCAATGGTTTACCACTCGTGTGCACCATGTATGCCTCTAGCGAGTGCTACTTTGGTGTTAACCTTACCCCTCTTTGCAAGCCTAGTGAGGTTTCCTACACTCTTATTCCCACCATGTGCTACTACGAGTTCCTTCCCGTCAACAGAACCAACTCCGACCACACCGATTCTCTCCCCGACAAGGAACAGCAAGACCTCGTTGAACTCGTTGATGTCAAGCTCGGCCAGGAATACGAGCTAGTTGTCACAACATACGCCGGACTATACCGCTACAGAGTGGGGGATGTGCTGAGGGTGGCCGGATTCAAGAACAAGGCCCCACAATTCAACTTCGTCTGCAGAAAGAACGTAGTCCTCAGCATAGATTCCGACAAGACAGACGAAGTGGAGCTCCAGAACGCAATGAAGAACGCCGTCACGCACCTCGTCCCGTTCGACGCCACCGTCTCGGAATACACAAGCTACGCAGACACAACAACAATCCCAGGCCACTACGTGCTCTACTGGGAGCTAACTCTCAACGGAACAACCCAAATTCCACCCTGCGTCTTCGAGGATTGTTGCTTAGCCATTGAAGAATCGCTCAACAGCGTTTACCGCCAGGGACGAGTCTCCGACAAGTCGATTGGGCCGCTGGAAATCAAGATCGTCGAACAGGGGACTTTTGATAAGCTTATGGACTATGCCATTAGCTTAGGCGCTTCCATAAATCAGTACAAGACTCCAAGGTGCGTCAAATTTGCACCTGTTGTGGAGCTTTTGAACTCAAGGGTAACTTCAACCTACTTTAGTCCCAAGTGTCCAAAATGGGTTCCAGGCCACAAGCAGTGGATCAATAACAATAATCAGAATTGA 1815 0.5041 MPEAPKDYNLVEQNRKILEFIEDVTSNADQVQQKVLSEILSRNANVEYLRRHGLNGQTDRDTFKKLLPVISYEDLQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLENGKGMYLMFIKAEAKTPSGIVARPVLTSYYKSSYFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWTLLCNDIRTGSVNGEITDVSVREAVMKILKPDPKLADFIEAECGKKSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLTPLCKPSEVSYTLIPTMCYYEFLPVNRTNSDHTDSLPDKEQQDLVELVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAMKNAVTHLVPFDATVSEYTSYADTTTIPGHYVLYWELTLNGTTQIPPCVFEDCCLAIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVVELLNSRVTSTYFSPKCPKWVPGHKQWINNNNQN 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01962 604 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 598 IPR004993 -
Aip03g01962 604 Pfam GH3 auxin-responsive promoter 21 566 IPR004993 -
Aip03g01962 604 PANTHER BNAC03G14570D PROTEIN 7 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01962 Aip-Chr3 27143275 27145407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01962 9 584 EF-hand Containing Proteins AT1G23160 49.915 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01962 K14487 - gmx:100791987 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01962 03 27143275 27145407 Aip03g01962 03 27143275 27145407 ECH