Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01958 ATGGCACCCTTCTTTAACAAACTCCTATTAACCCTCTCTCTCTTCTCTCTTATAATATCCCCTCAACGCTCTCTCTCATCCTCCATTCACGACCTTCTCCGTTCAAAAGGGTTGCCAGCTGGACTCCTACCGGAAGAAGTGAAGTCCTACAAGTTCTCCGACAATGGCCACTTGGAAGTGTTCCTCGACGCGCCATGCTTGACCAAGTACGAGAATAGGGTCTACTTCGAGAGCTTTGTAACCGCAAACCTCACCTATGGAAGCCTCATTGGTGTTGAGGGTCTTCAGCAAGAAGAGCTTTTTGTTTGGTTGCCTGTCAAGGACATTATAGTAAATGACCCTTCATCCGGTTTGATTCTATTTGATATTGGTCTTGCCCAGAAACAACTCTCCAGGTCTCTATTTGATATTCCACCTCGCTGCAAGAATGAAAATGGAGGTGGATTGAGGAATCATGTGAGGAAGGAGAAAGGATTCGAGGCCCTGAGGTAG 492 0.4654 MAPFFNKLLLTLSLFSLIISPQRSLSSSIHDLLRSKGLPAGLLPEEVKSYKFSDNGHLEVFLDAPCLTKYENRVYFESFVTANLTYGSLIGVEGLQQEELFVWLPVKDIIVNDPSSGLILFDIGLAQKQLSRSLFDIPPRCKNENGGGLRNHVRKEKGFEALR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01958 163 Pfam Protein of unknown function, DUF538 30 135 IPR007493 -
Aip03g01958 163 Gene3D - 16 144 IPR036758 -
Aip03g01958 163 PANTHER T31J12.3 PROTEIN-RELATED 11 162 IPR007493 -
Aip03g01958 163 PANTHER - 11 162 - -
Aip03g01958 163 SUPERFAMILY At5g01610-like 9 143 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01958 Aip-Chr3 26883018 26885615 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01958 - - gmx:100790931 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01958 03 26883018 26885615 Aip03g01958 03 26883018 26885615 ECH