Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01924 ATGGCTTCCACCACCATCTCCTCTCCCTCCTTCACCAAAACCGCAAGCCCTTCTTCTCTCCTCTCCCATAACACCGTGTTCCGCCTGAACCCCCAACAACATGCACGCAAAAACTTCAACCTCTCCCTCCGCGCATCCATGTCAGCATCATCACCATCACAACCACCGTACGATCTCCAGTCCTTCAAGTTCGAGCCAATCAGGGAGTCGATCGTGTCACGGGAGATGACCCGCAGGTACATGACAGACATGGTGACGCACGCCGACACCGACGTTGTGATCGTGGGTGCCGGTTCTGCCGGGCTGTCGTGCGCCTACGAGCTCAGCAAGAACCCGTCAATCAACATAGCCATCATTGAACAGTCTGTCAGTCCCGGTGGTGGCGCTTGGCTCGGTGGCCAACTTTTCTCTGCCATGGTAGTGCGTAAGCCGGCACATCTGTTCCTAGACGAGCTCGGCATTGAGTACGACGAGCAAGAGAACTACGTGGTGATCAAGCATGCAGCGTTGTTCACTTCAACCATCATGAGCAAGCTCCTCGCCCGCCCCAACGTGAAGCTATTCAACGCTGTGGCGGCCGAGGACTTGATAGTAAAGAACAACAGGGTTGGTGGTGTTGTGACAAACTGGGCCTTGGTGTCAATGAACCATGACACACAGTCATGCATGGACCCAAATGTGATGGAGGCTAAGGTTGTGGTTAGTTCATGTGGGCATGATGGGCCGTTTGGGGCCACAGGGGTTAAGAGACTCAAGAGCATTGGGATGATTGATAGTGTTCCTGGGATGAAGGCACTTGATATGAATGCTGCTGAGGATGCTATTGTCAAACTCACTCGGGAGATTGTTCCTGGAATGATTGTTACTGGCATGGAAGTTGCTGAGATTGATGGTGCCCCTAGAATGGGTCCAACATTTGGGGCAATGATGATATCTGGGCAGAAGGCAGCACATCTGGCTTTGAGAGCACTGGGACTCCCAAATGCTATGGACTACGCTGGAAACATCTCCCACCCTGAGCTTGTCCTTGCTGCTGCACAATCTCCTCATGTTGTTGATGCTTAA 1065 0.5277 MASTTISSPSFTKTASPSSLLSHNTVFRLNPQQHARKNFNLSLRASMSASSPSQPPYDLQSFKFEPIRESIVSREMTRRYMTDMVTHADTDVVIVGAGSAGLSCAYELSKNPSINIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGIEYDEQENYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKNNRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNAAEDAIVKLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALRALGLPNAMDYAGNISHPELVLAAAQSPHVVDA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01924 354 Gene3D - 58 88 - -
Aip03g01924 354 PRINTS Adrenodoxin reductase family signature 91 113 - -
Aip03g01924 354 PRINTS Adrenodoxin reductase family signature 115 128 - -
Aip03g01924 354 PRINTS Adrenodoxin reductase family signature 259 272 - -
Aip03g01924 354 Pfam Thi4 family 73 306 - -
Aip03g01924 354 Gene3D - 89 333 IPR036188 -
Aip03g01924 354 TIGRFAM TIGR00292: thiazole biosynthesis enzyme 69 323 IPR002922 -
Aip03g01924 354 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 8 333 IPR027495 GO:0009228
Aip03g01924 354 PANTHER THIAMINE THIAZOLE SYNTHASE 1 354 - -
Aip03g01924 354 PANTHER THIAMINE THIAZOLE SYNTHASE, CHLOROPLASTIC 1 354 - -
Aip03g01924 354 SUPERFAMILY FAD/NAD(P)-binding domain 52 317 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01924 Aip-Chr3 25996544 25999531 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01924 K03146 - gmx:547462 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01924 03 25996544 25999531 Aip03g01924 03 25996544 25999531 ECH