Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01903 ATGACGATGACTACTACTTCGTTTATCCAATTTCACCAAATAATTTGTTTCTTTCTCATTCTCACTTTATGGAACTCACAAGTAACAATGTCACGCAGGCTTTTAGAGTCTGCATGCACAAGAGAGACACATGAGAAATGGATGGAAGAATATGGAAAAGTGTATAAGGATGGTGAAGAGAAAGAAAGAAGGTTCGGAATATTCAAGAACAATGTTGAGTTCATTGAGTCCTTCAATGCGGCTGGGGACAAAAGTTTCAAGCTTAGTGTTAACCGATTTGCGGACCTAAGCGTTGAAGAGTTCAAGGCTTCTCTTAATGGCCTTCCCAAGAGTAGTCATTGGCCGGGGACGACCATGGAATCCAAAACGACGCCGTTTCGGCATGAGAATGTAACTGACATTCCAGAAACCGTGGACTGGAGGAAAAGAGGAGTTGTTACACCAATCAAGGACCAAGGCACATGTGGTAGTTGGTGGGCATTTTCATCTGTGGCTGCAGTTGAAGGAATCCACAAAATAAGTACAGGTAAACTAGTGCCTCTCTCAGTGCAAGAACTAGTAGATTGCGTAAGAGGCGACACTGAAGGATGCTATGGTGGTTATATGGAAGATGCGTATACATTCATTGCAAAGAATGGAGGAATATCAAGTGAATCAGACTACCCATACAAAGAAGTTGAGAAGCCATGTAAGGCTAATGAGAAGGAAACAATACATAATGTAGCTAAGATTAAAGGGTTCGAGAAGGTTCCTTCTAATAACGAAAAGGCACTCCTCAAAGCTGTGGCAAAACAACCAGTGTCGGTTTATCTTCAAGCTAGTGGGTATTATTTTCAATTTTATTCTAGTGGGATTTTCACTGGAATATGTGAAACTGAGCCAAACCATACTGCTACGGTAGTTGGTTATGGTAAAGATAAGGATGGTACCAAGTATTGGATAGTAAAAAATTCATGGGGTACTAATTGGGGAGAGAAAGGGTACATAAGGATGAAGAGAGAGATACATGCTAAGGAAGGGTTATGTGGAATTGCCAATAATGCCACATATCCAATTATTTAA 1062 0.4068 MTMTTTSFIQFHQIICFFLILTLWNSQVTMSRRLLESACTRETHEKWMEEYGKVYKDGEEKERRFGIFKNNVEFIESFNAAGDKSFKLSVNRFADLSVEEFKASLNGLPKSSHWPGTTMESKTTPFRHENVTDIPETVDWRKRGVVTPIKDQGTCGSWWAFSSVAAVEGIHKISTGKLVPLSVQELVDCVRGDTEGCYGGYMEDAYTFIAKNGGISSESDYPYKEVEKPCKANEKETIHNVAKIKGFEKVPSNNEKALLKAVAKQPVSVYLQASGYYFQFYSSGIFTGICETEPNHTATVVGYGKDKDGTKYWIVKNSWGTNWGEKGYIRMKREIHAKEGLCGIANNATYPII 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01903 353 Pfam Papain family cysteine protease 134 352 IPR000668 GO:0006508|GO:0008234
Aip03g01903 353 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 32 352 - -
Aip03g01903 353 SMART pept_c1 134 352 IPR000668 GO:0006508|GO:0008234
Aip03g01903 353 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 312 331 IPR025661 -
Aip03g01903 353 PANTHER SENESCENCE-ASSOCIATED GENE 12 32 352 - -
Aip03g01903 353 CDD Peptidase_C1A 135 351 IPR039417 -
Aip03g01903 353 Gene3D Cysteine proteinases 22 353 - -
Aip03g01903 353 SMART Inhibitor_I29_2 44 101 IPR013201 -
Aip03g01903 353 PRINTS Papain cysteine protease (C1) family signature 152 167 IPR000668 GO:0006508|GO:0008234
Aip03g01903 353 PRINTS Papain cysteine protease (C1) family signature 296 306 IPR000668 GO:0006508|GO:0008234
Aip03g01903 353 PRINTS Papain cysteine protease (C1) family signature 312 318 IPR000668 GO:0006508|GO:0008234
Aip03g01903 353 SUPERFAMILY Cysteine proteinases 41 352 IPR038765 -
Aip03g01903 353 Pfam Cathepsin propeptide inhibitor domain (I29) 44 101 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01903 Aip-Chr3 25242064 25243867 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01903 - - gmx:113001896 464.151