Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01708 ATGCAATCTGAGAAGTCTAACCTTGACTTCTTCCTCCGGTGTACCACACCAGTTGTACAATCTCAGCTTCTTCCAAACACGGAGATAAGGAAGTTGAACAGGTTATGGCATCCATGGGAGAGAGAAGCAGTGGAGTATTTCACTTTGGCTGATCTATGGAATTCTTTTGATGAATGGAGTGCTTATGGTGCTGGAGTTCCCATAACGCTTCCCAATGGAGAAACACTTGCTCAGTACTATGTCCCTTACCTCTCTGCAATTCAGATTTTCACCAGCAACACTTTCAGGGAAGAAGCTGAATCTGGTGACTGTGAGACAAGAGACTCATACAGCGATTCGTACAGTGAGGAGAGCGAGAGCGATAAGCTATGGAGGTGGGATGGAACCTCATCAGAAGAGGGAGGATTTGAACATGATAATAGCCTCTCGAATTTGAATGATAGGTTGGGTCACCTCTATGTTCAATATTTTGAAAGATCAGCACCATATGGAAGAGTTCCTCTCATGGATAAGATTACTGGGTTAGCAGAAAGATACCCAGGGTTGATGTCACTAAGAAGTGTGGATCTTTCACCAGCAAGTTGGATGGCAGTTGCATGGTACCCTATATATCATATCCCCATGGGGAGGACAATTAAAGATCTTTCTACATGCTTCCTCACTTACCACACACTTTCTTCATCATTTCAAGGTACTCCTATGATTATTCACAATTATTCTGCCTTCTTTTTCCACAAATTTTGCTAG 747 0.4284 MQSEKSNLDFFLRCTTPVVQSQLLPNTEIRKLNRLWHPWEREAVEYFTLADLWNSFDEWSAYGAGVPITLPNGETLAQYYVPYLSAIQIFTSNTFREEAESGDCETRDSYSDSYSEESESDKLWRWDGTSSEEGGFEHDNSLSNLNDRLGHLYVQYFERSAPYGRVPLMDKITGLAERYPGLMSLRSVDLSPASWMAVAWYPIYHIPMGRTIKDLSTCFLTYHTLSSSFQGTPMIIHNYSAFFFHKFC 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01708 248 Pfam Protein of unknown function (DUF789) 6 232 IPR008507 -
Aip03g01708 248 PANTHER T15D22.8 3 231 - -
Aip03g01708 248 PANTHER - 3 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01708 Aip-Chr3 20745898 20748395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01708 - - gmx:100799384 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01708 03 20745898 20748395 Aip03g01708 03 20745898 20748395 ECH
Aip08g00885 08 9687460 9692607 Aip03g01708 03 20745898 20748395 PCT