Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01679 ATGTATAAGAAAAAGACTAGTGACTTGACTGATTCAGTTACCTCCTCCTCCTCAGTTTCTGTTCATCCCAAAAATCGAAAAGTCGTTACTTCCCGTTTCATGTCTTCTCCTTCGCTTGCTGATCATATAACCAATGATAGGTTCAGAGACAGAGAGCATCACAAACCCACCAACATCAATACATCTTCAACCTCCACTTTCTCTTTCACCAGGCAGAAAAGCTCCAAGAACCATGCTAATAACGTTTTTTCCAAAGAGAAAGATGGACCCTCTTTTGCTGCTTCTCTAAGGAACATTGCAAATTTTGCTTCTTCGTCACCGTCCACTGCCATATCATCACCATCATCTTCGTCTTCTTCGGTGAAGAAACAAAGTTCCAACGATGCATTATGCATTGGTCCGGCAAGGTTATCTCTAGATGAAAACGCGTTGTACAAGAAATCCTTGTCTTCTTCACGTAGAGACCACCAAGATTACTATTCTAACGTTTCGAATTCAGTTGAATCGGAACCTGGTTATTTCAATTCTCCATCAAGAACTACATCATCTAGAAAACTTGGTAGAGAGGTTCCTTCCAAGTACATGGTGATGACCACTACTGATGCAGCATCGTTCGACGAGTCCATGCTATCAACGGCGAAGAACAAGAACACAATGTTGCAGAAAAGCAGCTCTATAAAGAGGGTAAACTCGCTTATTAATGGGTACAAGAGTTCAATGTCTCAGTGGGCATTATCTCCTGGGAGATCAGGGTCACCAACTATGTGTGTGGACAAGAAGGATAAACTACCGTCTTCGTTTTCGAGCTTGAGGCCTCAGAGGAATAATAAGAGTGTGGAGAAGATTCTGAGCATGGGTTTTGATCTATTCAGGACAAAGAAATCTTCTTCTTCTTCTTCTAACACTTCTGAGGATCTTCATTTCCTACGCTTGCTTGATAATCGTTTCATGCAGTGGCGGTTCGCTAATGCTAGAGCTCAGGTTGTGAACGAAAATCTTACTCAAACGGTTCAGAGTAATTTAATATGTGCTTTGGATGGTCTCACAAAGTTGAGAAATTCAGTGATGCAAAAGAAGATACAGCTTGAGAGGGAAAAGCTTAGGATGAAGCTCAACCTTGTACTACGTTCTCAAATGAAGCTATTGGAAACATGGGGAGCTATGGAAAGGCAACACATGGCAGAAATTGCTGCAATGAAGGACTGCTTGCATTCTGTTGTTTGTAAACTTCCGCTTTTGGAAGGTGCAACGGTGGACATACAATCAGCATTCATTGCTGAGCGGCAAGCATCTGATCTCACAGATTCCATCAACTCAATGTTAAATAGTTTTTCACTGCCGGCTTATAAGACTGCTGAGTTGGTATCAGAATTAGCAGAAGTTGTTGCACAAGAGAAGTTGCTCTTAGAGGAATTCTATGACCTTTTCCATGCCGTACGTGTCCTTGAGCAAGAGGTCACCACCCTTAGCCGCGGTCTCGTGGAAGCTAACGAAAGGATCGCCGATACGCAAGCTCAGCTCACGAACATAGACTCTTCCTTACGATCCATTGAAAAACTGCTTCGTGAGAATTTGAAATTGAAGCTTAAGGTGAATAATTATGGCTTCAATGGTGACGACACCATGGAAGGTGGTTCAGGGGCAGGGTCTGTGAGTGTGGGGGCTGAGCAACCGTGGCCCCGACTCAGAGTGAAAGTCTCCGATCTACCAATGTTCGACGGTGAGGGGGTGGAGGATTGGGTGTTTCGGGCCCGCCAATACTTATAG 1767 0.4369 MYKKKTSDLTDSVTSSSSVSVHPKNRKVVTSRFMSSPSLADHITNDRFRDREHHKPTNINTSSTSTFSFTRQKSSKNHANNVFSKEKDGPSFAASLRNIANFASSSPSTAISSPSSSSSSVKKQSSNDALCIGPARLSLDENALYKKSLSSSRRDHQDYYSNVSNSVESEPGYFNSPSRTTSSRKLGREVPSKYMVMTTTDAASFDESMLSTAKNKNTMLQKSSSIKRVNSLINGYKSSMSQWALSPGRSGSPTMCVDKKDKLPSSFSSLRPQRNNKSVEKILSMGFDLFRTKKSSSSSSNTSEDLHFLRLLDNRFMQWRFANARAQVVNENLTQTVQSNLICALDGLTKLRNSVMQKKIQLEREKLRMKLNLVLRSQMKLLETWGAMERQHMAEIAAMKDCLHSVVCKLPLLEGATVDIQSAFIAERQASDLTDSINSMLNSFSLPAYKTAELVSELAEVVAQEKLLLEEFYDLFHAVRVLEQEVTTLSRGLVEANERIADTQAQLTNIDSSLRSIEKLLRENLKLKLKVNNYGFNGDDTMEGGSGAGSVSVGAEQPWPRLRVKVSDLPMFDGEGVEDWVFRARQYL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01679 588 MobiDBLite consensus disorder prediction 58 79 - -
Aip03g01679 588 MobiDBLite consensus disorder prediction 104 126 - -
Aip03g01679 588 Pfam QWRF family 181 470 IPR007573 -
Aip03g01679 588 MobiDBLite consensus disorder prediction 155 185 - -
Aip03g01679 588 Coils Coil 345 365 - -
Aip03g01679 588 MobiDBLite consensus disorder prediction 148 185 - -
Aip03g01679 588 MobiDBLite consensus disorder prediction 7 42 - -
Aip03g01679 588 PANTHER AUGMIN FAMILY MEMBER 24 487 - -
Aip03g01679 588 MobiDBLite consensus disorder prediction 43 57 - -
Aip03g01679 588 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 24 487 - -
Aip03g01679 588 MobiDBLite consensus disorder prediction 1 86 - -
Aip03g01679 588 Coils Coil 479 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01679 Aip-Chr3 20298383 20308265 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01679 - - ahf:112732935 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01679 03 20298383 20308265 Aip03g01679 03 20298383 20308265 ECH
Aip08g00867 08 9388129 9390515 Aip03g01679 03 20298383 20308265 PCT