Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01641 ATGGATGAAGCTCTGATATCGGTGGACCGTTGGGCGAAGGGAAGCCAGGCGTACTTCCTGACCCACCTCCACGCCGATCACACCAAAGGCCTCTCTTCCACGTGGTCCCACGCTCCTCTCTACTGCTCCTCTTTCACCGCTGACCTCATTCCCTTAAAGTTCTCCGACTTCGACCTCTCTCTCCTCCACGTCTTCGAAATCGGCACCTGGCAAACCCTCAACCTCATCTCCCGTTCCTCCGGCGCCCCCACTGCCGTCGAATTCATCGCAATCGATGCCTGTCACTGCCCCGGTTCGGTTATGTTGCTGTTTCGTGGCGAGTTTGGGTGCATGCTGTACACGGGGGATTTTCGATGGGAGGTGGGTTGTGAGAGGGCTGCGAAGGCAAAGGAGATGCTTGCGGGTGCTATCAAGGATGATAAGGTGGATGTGGTTTACCTTGACAACACGTATTGTAATCCTATCTATGATTTTCCAAATCGCCAAGTTGCAGCTCAGCAGGTTATTGATATCATTACTTCTCATCCTGACCATGATGTTATTATTGGGATTAACACTCTGGGAAAAGAAGATCTTTTGGTTCAAATTTCAGAGGCGCTTAAGATTAAGATTTGGGTGTGGCCAGAGCGAATGTGGACTATGGATCTTCTTGGTTTCTATGATAACTTTACAATCAACACAAGTATTACTAGAGTGAGAGCTGTTCCTCAGTATAGCTTTAATGTTGAAACTTTAGAGGAACTGAACAGAATTAAGTGCCCAACCATAGGTATTATGCCATCAGGTCTTCCATGGGTAAAGAAATCCCCTCCGAAGACCAAGTGTATTTCACGTGCACATTTGACAGCTCGATGTAAGAAAGCAGAATGGAGTGAAGACGACGATGAGTACGAGCCAACAGGGGATATAGGAGGACCTCCCGAGAAGCTTCACAAGTACATATTTACTGTTCCATACTCTGATCATTCAAATTTTGCAGAGATAATGGATTTTGTGAAGCTTATCAGGCCAAAAAACCTGAAGGGCATTGTGTCTTCTTCATCATGTTATATTGAACCTATGTACTACCTCGGTCTACTTTGTCAAGGCAACCGTCCTTCAGAAGTGTTGAATAGCAAGCTTAAAAGGAAAGCTAGAGCTAAAGTAGCTGGGAGCAACAAAAAACCATCAGGTTCTTATAATGCTGAGTTGGTGAGAAAGAGAAGCATGACTTTGAAGGCCAGGCTTAAGCGAATTCGTTTGAGCAAGCATAGTATACTGAGAAAAGTGCGCAAGGGTGCGAAAATTCCGGATATAAGTGCTGATCTAAAGACCGACAGTGATGGAAATCAAGTGGAATAG 1341 0.4586 MDEALISVDRWAKGSQAYFLTHLHADHTKGLSSTWSHAPLYCSSFTADLIPLKFSDFDLSLLHVFEIGTWQTLNLISRSSGAPTAVEFIAIDACHCPGSVMLLFRGEFGCMLYTGDFRWEVGCERAAKAKEMLAGAIKDDKVDVVYLDNTYCNPIYDFPNRQVAAQQVIDIITSHPDHDVIIGINTLGKEDLLVQISEALKIKIWVWPERMWTMDLLGFYDNFTINTSITRVRAVPQYSFNVETLEELNRIKCPTIGIMPSGLPWVKKSPPKTKCISRAHLTARCKKAEWSEDDDEYEPTGDIGGPPEKLHKYIFTVPYSDHSNFAEIMDFVKLIRPKNLKGIVSSSSCYIEPMYYLGLLCQGNRPSEVLNSKLKRKARAKVAGSNKKPSGSYNAELVRKRSMTLKARLKRIRLSKHSILRKVRKGAKIPDISADLKTDSDGNQVE 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01641 446 Pfam DNA repair metallo-beta-lactamase 224 340 IPR011084 -
Aip03g01641 446 Gene3D - 5 343 IPR036866 -
Aip03g01641 446 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 6 424 - -
Aip03g01641 446 Gene3D - 157 322 - -
Aip03g01641 446 PANTHER PROTEIN ARTEMIS 6 424 - -
Aip03g01641 446 SUPERFAMILY Metallo-hydrolase/oxidoreductase 16 340 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01641 Aip-Chr3 19311690 19314621 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01641 K15341 - gmx:100775842 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01641 03 19311690 19314621 Aip03g01641 03 19311690 19314621 ECH