Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01624 ATGCCACAGGCTCCCATTCAGTACAACAACATCCAAAATGACGAATTTATCCATGATGATAATTATGGTAACAATAACAAGAAAGCACTGAAATACATTGAGGATGTTACGAGCAACGCTGATGAAATCCAAGAAAGGGTAATTGAGGAGATCCTTAAATCAAGTTCTCATGTTGAGTACCTTGAAAGGCATGGCCTAAATGGTCGCACAGACAGGGACACATTCAAGAAGGTCATTCCTGTCGTCAATTATGAGGATTTGAAGCCAGAAATTGATCGTATTGCTAATGGTGATTCCTCACCTATTTTGTGTTCCAAACCCATATCAGAGTTCCTCACTAGCTCCGGCACATCCGGTGGGGAGAGAAAGCTGATGCCAACAATAGAAGAGGAGCTAGGGAGAAGGACATTACTTTACAGCCTATTGATGCCGGTAATGGACCAATTTGTACCAAACTTACACAAAGGCAAAGGCATGTACTTCTTGTTCATCAAATCAGAGACAAAAACCCCAGGTGGACTCATAGCACGCCCAGTTCTAACAAGCTATTACAAAAGCTCACATTTCAACAACAATAACTCTTCTCATAACAACCCTCACAAAAACTACACTAGCCCTAATGAGACCATCCTCTGCCTAGACTCTTTCCAGAGCATGTACTCCCAATTGCTCTGTGGCCTTCTCCAGAGCCACCAAGTCCTCCGAGTTGGCGCCGTCTTCGCCTCCGGATTCATCCGCGCAATTAAGTTCCTCGAGAAATTTTGGGCCGATTTGTGTCGCGACATTCGCACCGGCACAATTGACCCCAAAATTAGTGACACTAGTGTTAGGGAGGCTGTGATGAGAATTATGAAGAGGCCAAATCCAAAGCTTGCTTCTTGTATTGAAGGTGAATGCATGAAGGGGTCGTGGAAAGGGATCATTACTAGGCTCTGGCCTAATACAAAATATGTTGATGTTATTGTGACAGGGACCATGGCTCAGTATATTCCTATATTGGATTATTATAGTAATGGTTTGCCTCTTGTTTGTACCATGTATGCTTCTTCTGAGTGTTACTTTGGGATCAATTTGAACCCTTTGTGTGACCCAGGGAAGGTTTCATATACACTAATTCCCACCATGGCCTACTTTGAGTTCTTGCCTCTCAACAAGATGAATGGTGGTAATGGACATAGCAATAATTCAAATAATCAATTGGTAAAGGAAGATCTTGTTGACCTTGTAGATGTAGAGTTGGGTCAAGAATATGAGCTTGTGGTAACCACCTATGCAGGGCTCTATAGGTACCGAGTTGGTGACATACTCCGTGTAGCAGGATTCAAGAACAAGGCTCCTCAATTCAACTTCGTCTGTAGAAAGAACGTCGTCCTGAGCATAGATTCCGACAAAACCGACGAAGTCGAGCTACAAAATGCCGTCAAGAGCGGCGCAAACCACCTCAAACAATTCGGTGCAACGGTCACAGAATACACAAGCTGCGTGGACACTTCCACCATCCCAGGACACTACGTCTTGTTCTGGGAGATCAACACGCATACTAAACAAACCCTAAACACAGACAAAAATATTTCTTCGTCTGTGTTTAAGGAATGTTGTCACGCTGTTGAGGAATCCCTCAACAGCGTGTATCGCCAGGGAAGGGCGTCGGAGTCTATTGGGCCGTTGGAAATCAAGATTGTGGAGAATGGTACTTTTGATAAGCTTATGGATTTTGCTTTGAGCCAAGGTGCATCAATAAATCAGTACAAGACACCAAGGTGTGTGAAATATGCTCCCATTGTGGAACTGTTGAACTCAAAAGTGGTGTGTAGCTACTTCAGTGAAAAATGTCCTAAGTGGGTTCCTGGTCACAAGAGATGGTGCAATAACAATTTTGAATGA 1884 0.4358 MPQAPIQYNNIQNDEFIHDDNYGNNNKKALKYIEDVTSNADEIQERVIEEILKSSSHVEYLERHGLNGRTDRDTFKKVIPVVNYEDLKPEIDRIANGDSSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRTLLYSLLMPVMDQFVPNLHKGKGMYFLFIKSETKTPGGLIARPVLTSYYKSSHFNNNNSSHNNPHKNYTSPNETILCLDSFQSMYSQLLCGLLQSHQVLRVGAVFASGFIRAIKFLEKFWADLCRDIRTGTIDPKISDTSVREAVMRIMKRPNPKLASCIEGECMKGSWKGIITRLWPNTKYVDVIVTGTMAQYIPILDYYSNGLPLVCTMYASSECYFGINLNPLCDPGKVSYTLIPTMAYFEFLPLNKMNGGNGHSNNSNNQLVKEDLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKSGANHLKQFGATVTEYTSCVDTSTIPGHYVLFWEINTHTKQTLNTDKNISSSVFKECCHAVEESLNSVYRQGRASESIGPLEIKIVENGTFDKLMDFALSQGASINQYKTPRCVKYAPIVELLNSKVVCSYFSEKCPKWVPGHKRWCNNNFE 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01624 627 Pfam GH3 auxin-responsive promoter 33 590 IPR004993 -
Aip03g01624 627 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 20 621 IPR004993 -
Aip03g01624 627 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 20 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01624 Aip-Chr3 18953998 18958395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01624 30 608 EF-hand Containing Proteins AT1G23160 48.797 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01624 K14487 - gmx:100819676 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01624 03 18953998 18958395 Aip03g01624 03 18953998 18958395 ECH