Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01622 ATGGAAACACGATCCACAAAGCGCAAGAAGATTGCTCATCGGAATCAAACGACAGCGAAAGGCGCTAACAAAAAGAAGGCCATTGATAGGATCAGTGATCTCCCTGACGCGATTCTTCACCGCATTCTCTTCCTCCTTCCCATCAAATGCATTGCACAGATGAGTGTTCTTTCAAAGAGGTGGAGATTCCTCTGGACAACGTTTCCAGATCTCGATTTCACCACCATCAGCCCTTTCACAATATCCCCGCCGACAACAAAAAACCGTTACAAATTCTCAACCGTCAACCGCCACTCTGCCTCCTCAAGAAAGCCGGATTTCATCACGCAAGTTTTCTCGATCCGCGAGAAGAATTCCGACATCAGAGTCCTCTGTTTTCGCGCCCGTTTAAGCTTCTCAAGGCTCAACAACCTGATCCGAAGCGCCATCCGTCACAACGTCAAAGAACTGGACGTCGAAGTCGCAACGGAAGTCGTTACAGATGATTATTTCAACTTCCCTCGCTGCGTCATCGGCAGCCAATCCTTAAAAGTGTTAAAATTGAAGTCCGGATTTCGTCTCCCACCGTCCTCTATCATGAGGGACGGTTTCCAGTCTTTGCAAACACTCTCGTTATCGCTAGTAATTCTGTATAATCAGCCTTTTCTCTCCGATTTGTTCTCCGAATCATCGTTTCCTCTTCTCAAGAATTTGCACCTGGACATGTGTTTCGGTTTGAAATACCTCCGTGTTGGCTGCAAGGCTCTTGAAGATTTCAGTTTACAGAAATGTTTTCAGTTACAAGGGTTGGATATCTCGTGTGCGAAGCTCGAGAATTTGAAGGTGGCGAGTTGTTTTGACGCTTATAGTGAGAAGAGTTGGGTGAGAATTAGTGCCCCGAAGCTTCAAAATTTGGTTTGGCACTATAATGCGGTTACAGATATGAGTATGTTTGAGGATCATTATCATCATCAGTCCTCGTCGAATTCATTTTCGTTGTTCTGTGGTGATGCTTCAGTTGGTTTCTTCATACTGAATGAGGATGTTAGTATTGGTAAGCTTCAAAGTGTGAATAATTTTTTGTCTGGACTCTCTCATGCTCGTTCCTTGACTCTTGAAAGCCAAACCATTGAGGTTCTATCAAATAATAAATTCTTTATTCAGCCATTTTATAGTCTTAAATCATTAGAGCTGCATACTGGTTTCAACAAAAGTAATGTTCAAGGATTAGCATGCCTATTCAGGAGCTCTCCTACACTCCACACTCTAATTCTCAAGATCATTAACGATTTCCAGATTGAAAGAAAACAATGGAACAGGGACTTGTGGGACATGACAAGCACGGAGGAAGAGCAATATTGGGAATCTCAAATACCAAGTCTAAAGCCCTTTTTACAACACTTGAAAGTGGTGAAAATCCATGGGTTTCTGGATTGTGAGAATGAAGTTACACTTGCAAAATTTCTCCTCAAGCATGGGAAGGCCTTAGAAGAAATGCAATTATGTGCAGGACAGGTCAATGCTAGAGACACGCTTAGACGACAAAAAATAAGGTCACAAATGATGGGATTTTCATGGGCTTCTTCAAATGCAAAAGTGGCATTTCAATAG 1590 0.427 METRSTKRKKIAHRNQTTAKGANKKKAIDRISDLPDAILHRILFLLPIKCIAQMSVLSKRWRFLWTTFPDLDFTTISPFTISPPTTKNRYKFSTVNRHSASSRKPDFITQVFSIREKNSDIRVLCFRARLSFSRLNNLIRSAIRHNVKELDVEVATEVVTDDYFNFPRCVIGSQSLKVLKLKSGFRLPPSSIMRDGFQSLQTLSLSLVILYNQPFLSDLFSESSFPLLKNLHLDMCFGLKYLRVGCKALEDFSLQKCFQLQGLDISCAKLENLKVASCFDAYSEKSWVRISAPKLQNLVWHYNAVTDMSMFEDHYHHQSSSNSFSLFCGDASVGFFILNEDVSIGKLQSVNNFLSGLSHARSLTLESQTIEVLSNNKFFIQPFYSLKSLELHTGFNKSNVQGLACLFRSSPTLHTLILKIINDFQIERKQWNRDLWDMTSTEEEQYWESQIPSLKPFLQHLKVVKIHGFLDCENEVTLAKFLLKHGKALEEMQLCAGQVNARDTLRRQKIRSQMMGFSWASSNAKVAFQ 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01622 529 MobiDBLite consensus disorder prediction 1 24 - -
Aip03g01622 529 SMART 9598neu4hmm 455 529 IPR006566 -
Aip03g01622 529 Pfam FBD 457 493 IPR006566 -
Aip03g01622 529 ProSiteProfiles F-box domain profile. 28 76 IPR001810 GO:0005515
Aip03g01622 529 SUPERFAMILY F-box domain 28 76 IPR036047 GO:0005515
Aip03g01622 529 PANTHER F-BOX PROTEIN-LIKE 25 474 - -
Aip03g01622 529 SUPERFAMILY RNI-like 140 308 - -
Aip03g01622 529 Gene3D - 12 68 - -
Aip03g01622 529 Pfam F-box domain 31 66 IPR001810 GO:0005515
Aip03g01622 529 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 25 474 - -
Aip03g01622 529 Gene3D Ribonuclease Inhibitor 106 328 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01622 Aip-Chr3 18870393 18880820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01622 29 419 EF-hand Containing Proteins AT5G41840 23.502 8.91e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01622 - - ahf:114927451 1038.48