Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01599 ATGGAATCTTGTTACTGCAATCTTGAAGTTGAGGTAAATGGAGAAGAGACCTTCATGGTTGACAAGGCTATTATTGCTCAATACTCAAGCAAGTTAGCTAGATTATTTGGAAAATCTAGTGGTCCCAGTGGGAAACTCAAAGTAATATTCCATGATTTTCCGGGGGGTGCTGAGGGTTTTGAGCTTATGCTAAAATTTTGTTACAACAATGGAAGCATTGACATGAACTCTTCCAATTTGTTACAAGCACATTGTGCTGCTGAGTACATGGAAATGAAGGATTCTGTTCTTGGTGTTCCTAATTTGTTGGAACAAACAGAGAAGTCACTTGAAGAAATAAGCTATTGGAGATGGTCTGAACTTTTGGTTGCTTTGAAACAGTGCCAGAATCTATCAACTGTGTTGGATTACTATTCTAATTCAATGATGCTGGAGAAGTGTATGGACACCATTGTTGGGAGAATGTTTCTTGCTAGTGAAGCAAGCCCATGCCCTTCAACTTGCTCAACTGATAGTTCTTCCGGTGGGGTCCGGTTTTCGTGTGATTCGAAGAGTACTGAGAGTATCAAGACGAGTAGCTTCAGTTCGCGTCCGTGTTGGTGGTTTGAGGATCTTGTTTTCTTGAATCCGGTTTTGGTTGAAATGTTGGTGAGGTCAATGATCACAAGAAAATTGGAACATGGTTTGATTAGTAGGTTTCTAATGTATTATCAAAAAGCAAGATTTTCAAGTACTATTGATGTGAGTGAGAAGATTAAGATCTTGGAAATGGTCATAGATATGCATTATGATATGGAGTACTACCATAATTGTTCAATCCCTTTTAAGACCTTGTTTGGGATTCTAAGAATTAGTTTGAGTTTGAACATAAGCAAAAGTTGTAGGCACAAGTTGGAGGCCATGATTGGTTCCAATTTGGATCAAGCAACTTTGGACAATTTGCTTGTTCCATCACCATATGGAATAAGTTACTTGTATGATGTGAAACTTGTTCTCAAGTTTCTAAAGGCGTTCTTGCGACGCGGCGGCGGCGTTGTTGCTCCCATTAGGATGAAGAAAGTTGCAAGCTTGATAGATTTGTACATAGCAGAGATAGCACCTGATCCTTCTTTAAGGCCTTCTAAGTTCTTGGCTCTTGCCACTGCAATTCCAGATTCTGCAAGAGATTCTTATGATGAGCTCTACCATGCCATGGACATGTACCTTGAGGTTCATGGTCAATTGTCAGAAGAAGAAAAGGTGAAGATATGTTGTGGATTAAACTATGATAAGCTTTCACCTCAAGCTTGCATACACCTTTCTCAGAACACAAAATTCCCATCAAAATCAGCAGTTCAGGCTCTCATATCACAACAATCAAAGCTCAAAAACTTGATCCAATCTACTCCAGCTACATCACCATTACTCAATGGCTCATCACCACCTTTCTGCTTTACAAATGTTAATGCACAAAAGGGAAACAAAGACAAAAGCAATGACCAAGTTGTGTTGTATTCTTCTACTGGAGACTTTGATGCTTCATCTGATAACGAGAGACTCAAAGCACATTTGCAAGGAATGCAATGGAGGGTTATGGAATTAGAGAAAATCTGTAAGAAAATGCAAACTCAGATGGCAAAGATCACAAAATCAAAAGTACCACCCAATAGTTATGCAAGATCTTTGCCTAAGCTCTGTTCATGA 1683 0.3922 MESCYCNLEVEVNGEETFMVDKAIIAQYSSKLARLFGKSSGPSGKLKVIFHDFPGGAEGFELMLKFCYNNGSIDMNSSNLLQAHCAAEYMEMKDSVLGVPNLLEQTEKSLEEISYWRWSELLVALKQCQNLSTVLDYYSNSMMLEKCMDTIVGRMFLASEASPCPSTCSTDSSSGGVRFSCDSKSTESIKTSSFSSRPCWWFEDLVFLNPVLVEMLVRSMITRKLEHGLISRFLMYYQKARFSSTIDVSEKIKILEMVIDMHYDMEYYHNCSIPFKTLFGILRISLSLNISKSCRHKLEAMIGSNLDQATLDNLLVPSPYGISYLYDVKLVLKFLKAFLRRGGGVVAPIRMKKVASLIDLYIAEIAPDPSLRPSKFLALATAIPDSARDSYDELYHAMDMYLEVHGQLSEEEKVKICCGLNYDKLSPQACIHLSQNTKFPSKSAVQALISQQSKLKNLIQSTPATSPLLNGSSPPFCFTNVNAQKGNKDKSNDQVVLYSSTGDFDASSDNERLKAHLQGMQWRVMELEKICKKMQTQMAKITKSKVPPNSYARSLPKLCS 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01599 560 Gene3D Potassium Channel Kv1.1; Chain A 1 144 IPR011333 -
Aip03g01599 560 ProSiteProfiles BTB domain profile. 6 70 IPR000210 GO:0005515
Aip03g01599 560 Pfam BTB/POZ domain 4 97 IPR000210 GO:0005515
Aip03g01599 560 Pfam NPH3 family 200 430 IPR027356 -
Aip03g01599 560 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 12 560 - -
Aip03g01599 560 ProSiteProfiles NPH3 domain profile. 199 454 IPR027356 -
Aip03g01599 560 SUPERFAMILY POZ domain 3 96 IPR011333 -
Aip03g01599 560 PANTHER OS12G0117600 PROTEIN 12 560 IPR043454 -
Aip03g01599 560 SMART BTB_4 6 107 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01599 Aip-Chr3 18617506 18621224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01599 18 540 EF-hand Containing Proteins AT3G44820 28.147 5.99e-59 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01599 - - adu:107477823 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01599 03 18617506 18621224 Aip03g01599 03 18617506 18621224 ECH