Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01565 ATGCATAAATCTTCATCTGCTTTTCCAAAATCAGAAACCATGGCTAGAAAAGGCCTTAGAATGTGCATGATTGTGTGCTCAATTTTCTTGATCGTTGTTGTGACAATCATTCTGGCCATATCTTTGACCATCTTAAAACCCAAAGACCCAGATATTAGTGTCCACCCATATGGCCTTGAAAATTTTCAGATTATACAACCCAATGTAACAGCTGTGCCACTTGGCATGGTGATCACTATAGTCAATCCCAATTATGGAACCTTCAATTACAAAAATACCACTGGCTATCTTAGTTATCATGACATCAACGTAGCCAAAGCTGTGGTAGTATCAGGATCTGTGCCTGCTCGTGGCTTATTTAATATTACCACTGTTGCAGGTATCATGACTCAAAAGTTGATGGATGATACACAATTTTGGTCAGACATTGAAGTTGGCACATTGAATTTTGAAGCAACTATCACTCTTCCTGGGAAAGTGACTATGCTCAAGATTTTCAAAAAGAAGGCCCTGGTTCATGTAGCATGTGACCTCTCTTTTAAGCTTAATTTAAGCTCCATTCATACTGATTCAAGCTGCATATCCAAGATCAAGCTTTGA 600 0.3867 MHKSSSAFPKSETMARKGLRMCMIVCSIFLIVVVTIILAISLTILKPKDPDISVHPYGLENFQIIQPNVTAVPLGMVITIVNPNYGTFNYKNTTGYLSYHDINVAKAVVVSGSVPARGLFNITTVAGIMTQKLMDDTQFWSDIEVGTLNFEATITLPGKVTMLKIFKKKALVHVACDLSFKLNLSSIHTDSSCISKIKL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01565 199 Pfam Late embryogenesis abundant protein 78 176 IPR004864 -
Aip03g01565 199 SUPERFAMILY LEA14-like 32 124 - -
Aip03g01565 199 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 14 198 - -
Aip03g01565 199 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 14 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01565 Aip-Chr3 17621541 17622319 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01565 - - aip:107634840 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00767 08 7835342 7835902 Aip03g01565 03 17621541 17622319 PCT