Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01543 ATGGCAGAACCCAAAGTTAAGTATGATCGCCAACTCAGGATATGGGGTGAACAAGGACAGGCAGCACTTGAGAAATCTAGTATTTGCTTACTTAACTGTGGCCCTACTGGCTCTGAAACACTTAAGAATCTTGTTCTTGGTGGGATAGGAAGCATCACTGTAGTTGATGGATCTAAAGTTGAAGTGGGTGATCTTGGAAACAATTTTCTGGTGGATGAATCAAGTGTCGGGCAGTCAAAGGCAAAATGTGTTAGCTCATTTCTTCAAGAGCTAAACGATTCTGTTAAAGCAAAATTTGTAGAGGAGTATCCAGAGGCATTGATTGAGACAAACCCATCATTCTTTTCTCAGTTTACTTTGGTCATTGCCACACAGCTTGTCGAAAGTTCAATGATAAAGCTTGATCGAATCTGCCGGGAGGCAAACGTTATTTTGATCTTTGCTCGTTCCTATGGCCTTACAGGGTTTGTTCGAATTAGTTTGAAGGAGCATACTGTCATCGAGTCAAAGCCTGAGCATTTTCTGGATGACCTCCGGTTAAATAATCCTTGGCTTGAACTAAAGAGTTTTGCAGACAGCATTGACTTGACTGTGCAAGATCCTGTTGCTCATAAGCACATACCATATGTTGTCATTCTTGTCAAGATGGCTGATGAGTGGGCCAAAAGCCATGGTGGTAAGCTCCCATCAACAAGAGAACAAAAAAAGGAGTTCAAGGATCTTTTGAAGGCCAGGATGGTTTCACAAGATGAAGATAATTATAAAGAAGCTATTGAAGCATCATTCAAAGTGTTTGCTCCCCGAGGAATTAGTTTGGATTTGCAGAGGATACTAAATGATAGTTCTTCTGAGGTGGACTCTAATTCATCATATTTTTGGGTGTTGGTGGCTGCTCTGAAGGAATTCATTGCAAATGAAGGTGGTGGGGAGGCACCACTTGAAGGATCTATACCGGATATGACATCTTCCACCGAGCAATATATTAATTTGCAGAATATCTATCTAGCTAAGGCTGAGGCTGACTTTCTTGTAATGGAACAACTAGTGAGAAGTATCTTGAAGAAGATTGGTCGAGATTCAAATAGCATTCCAAAGGCAACAATTAGAAGTTTCTGTAAAAATGCAAGAAAACTCAGAGTTTGCAGGTACCGGTCAATTGAAGATGAATTTAATTCTCCAAACATACCTGAGTTGCAGAGGTACCTAACTGATGAGGATAGCAGCATTGCTGTAGGAATTTATATTTTGCTTCGTGCTGTGGACCGGTTTGCTGCTAATTACAACAGTTTTCCTGGACAGTTTGACAGTGCAACGGATGAGGATATGCCAAGATTGAAGAGTGCAGCTATTAGCCTCCTAAGTGACCTGGGATGCAATGGAGCCGCTTTGGCTGAGGACCTCATCAATGAGATGTGTCGATTTGGTGCAGCAGAGCTTCATGCTGTGGCTGCTTTGGTTGGTGGAATTGCATCCCAAGAAGTGATCAAGCTCATAACAAGGCAGTTTGTACCGATGTCCGGAACCTACATCTTCAATGGCATTGACCACAAGTCACAGCTGTTGTCCCTGTAA 1572 0.4218 MAEPKVKYDRQLRIWGEQGQAALEKSSICLLNCGPTGSETLKNLVLGGIGSITVVDGSKVEVGDLGNNFLVDESSVGQSKAKCVSSFLQELNDSVKAKFVEEYPEALIETNPSFFSQFTLVIATQLVESSMIKLDRICREANVILIFARSYGLTGFVRISLKEHTVIESKPEHFLDDLRLNNPWLELKSFADSIDLTVQDPVAHKHIPYVVILVKMADEWAKSHGGKLPSTREQKKEFKDLLKARMVSQDEDNYKEAIEASFKVFAPRGISLDLQRILNDSSSEVDSNSSYFWVLVAALKEFIANEGGGEAPLEGSIPDMTSSTEQYINLQNIYLAKAEADFLVMEQLVRSILKKIGRDSNSIPKATIRSFCKNARKLRVCRYRSIEDEFNSPNIPELQRYLTDEDSSIAVGIYILLRAVDRFAANYNSFPGQFDSATDEDMPRLKSAAISLLSDLGCNGAALAEDLINEMCRFGAAELHAVAALVGGIASQEVIKLITRQFVPMSGTYIFNGIDHKSQLLSL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01543 523 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT AXR1 2 523 - -
Aip03g01543 523 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 523 IPR045886 -
Aip03g01543 523 Pfam ThiF family 8 501 IPR000594 -
Aip03g01543 523 CDD APPBP1_RUB 7 521 - -
Aip03g01543 523 PIRSF APP-BP1 1 523 IPR030667 GO:0019781|GO:0045116
Aip03g01543 523 Gene3D - 356 523 - -
Aip03g01543 523 Gene3D - 2 268 - -
Aip03g01543 523 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 519 IPR035985 GO:0008641
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01543 Aip-Chr3 17208690 17216311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01543 7 195 EF-hand Containing Proteins AT2G30110 24.121 5.46e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01543 K04532 - gmx:100793799 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01543 03 17208690 17216311 Aip03g01543 03 17208690 17216311 ECH