Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01536 ATGGTCATATACCTGTCTCCTTCTCCTCCTTCCCATTCTTCCACTTCCATACTCAGATTCTCAAACCCAAGGACACCCATTTCAGATTCTTCCTTCAAGCCCAAACCCCATTTCTCAATACCACTTTTTTCTCACTCTTTTGGCTCCAATTTTTCAACTTTAACATTCAAGCAGCAGTTCTTGAATCACAATAATAGTAGTGGCCGGTTCACACATGGAAACAGGGTTGATTTCAGGACCTTGGCTATTCCTGGGTTTGACTATGGAAACTTTGAAGGTCCTCAATCTGTTCTTGAAGCTGCTGCTGTTCTAACAGCAATCATTGTTGTTCATGAAAGTGGCCATTTCCTTGCTGCTTCACTTCAAGGTATCCATGTGAGTAAGTTCGCTGTTGGGTTTGGTCCAATTCTAGCTAAGTTCAATTCAAAGAATGTTGAGTATTCTATTAGAGCTTTCCCTCTAGGTGGATTTGTTGGGTTCCCTGATAATGATCCTGAAAGTGATATCCCTGTTGATGATGAGAATTTGCTTAAGAACAGGCCAATTTTGGATAGGGTTCTTGTTGTTTCAGCTGGTGTTATTGCCAACATAGTGTTTGCAATTGCTATAATCTTTGTTCAAGTTCTCACTGTTGGTTTGCCTGTTCAAGAGGTTTTCCCTGGTGTTATGGTTCCTGATGTGAAACCCTTTTCAGCTGCTTCTAGAGATGGATTGCTTCCTGGTGATTTGATTCTTCAGGTTAATGGTAGTGAGTTTCCAAAACCGGGTCCTAGTTCTGTTACTAAGGTTGTTGATGTTATCAAGAAGAACCCCAAGAGATATGTTTTGCTTAAGGTTAAGAGGGGGATGCAGGACTTTGAAATTAGGGTCACCCCAGATGAGAATTTTGATGGGACTGGTAAAATTGGTGTTCAGTTATCACCAAATGTGAAGATTGAAAAAGTTAGGCCAAAGAATCTTGTGGAAGCTTTGAACTTTACTGGGAAAGAATTTTGGGGTCTTTCTTCTAATGTTTTAGATGGATTGAAGCAGACATTCTTGAACTTTTCACAGTCTGCTGGTAAGGTTTCAGGTCCTGTGGCGATTATTGCTGTCGGCGCTGAAGTTGCGAGGTCAAACATTGATGGTCTTTACCAATTTGCTGCCATACTCAACATTAACCTTGCTGTTATTAACCTCCTTCCCTTGCCTGCTTTGGATGGGGGTTCGTTGGCATTGATCTTTATCGAGGCGGCCAGGGGTGGGAGGAAGCTACCTTTGGAAGTGGAACAACGGATAATGTCGTCCGGAATCATGTTTGTTATACTTCTGGGGTTATTCCTCATTGTTCGCGATACCTTAAACCTTGATATTATCAAAGATATCTTGTAA 1371 0.415 MVIYLSPSPPSHSSTSILRFSNPRTPISDSSFKPKPHFSIPLFSHSFGSNFSTLTFKQQFLNHNNSSGRFTHGNRVDFRTLAIPGFDYGNFEGPQSVLEAAAVLTAIIVVHESGHFLAASLQGIHVSKFAVGFGPILAKFNSKNVEYSIRAFPLGGFVGFPDNDPESDIPVDDENLLKNRPILDRVLVVSAGVIANIVFAIAIIFVQVLTVGLPVQEVFPGVMVPDVKPFSAASRDGLLPGDLILQVNGSEFPKPGPSSVTKVVDVIKKNPKRYVLLKVKRGMQDFEIRVTPDENFDGTGKIGVQLSPNVKIEKVRPKNLVEALNFTGKEFWGLSSNVLDGLKQTFLNFSQSAGKVSGPVAIIAVGAEVARSNIDGLYQFAAILNINLAVINLLPLPALDGGSLALIFIEAARGGRKLPLEVEQRIMSSGIMFVILLGLFLIVRDTLNLDIIKDIL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01536 456 PANTHER REGULATOR OF SIGMA-E PROTEASE RSEP 71 456 IPR004387 GO:0004222|GO:0006508|GO:0016021
Aip03g01536 456 CDD S2P-M50_PDZ_RseP-like 97 448 - -
Aip03g01536 456 ProSiteProfiles PDZ domain profile. 211 282 IPR001478 GO:0005515
Aip03g01536 456 CDD PDZ_metalloprotease 209 292 - -
Aip03g01536 456 SMART pdz_new 209 283 IPR001478 GO:0005515
Aip03g01536 456 TIGRFAM TIGR00054: RIP metalloprotease RseP 223 449 IPR004387 GO:0004222|GO:0006508|GO:0016021
Aip03g01536 456 SUPERFAMILY PDZ domain-like 181 282 IPR036034 GO:0005515
Aip03g01536 456 Pfam PDZ domain 224 281 IPR041489 -
Aip03g01536 456 Pfam Peptidase family M50 101 437 IPR008915 GO:0004222|GO:0006508
Aip03g01536 456 Gene3D - 214 307 IPR036034 GO:0005515
Aip03g01536 456 PANTHER MEMBRANE METALLOPROTEASE ARASP2, CHLOROPLASTIC-RELATED 71 456 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01536 - - lang:109351773 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01536 03 16960397 16962227 Aip03g01536 03 16960397 16962227 ECH