Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01478 ATGACTTTGCTTCGATGGCTTGCGATTCTGTTCCTTCTGCTCGCCGTGTACTGCGGTCTCGATCCGTTTCGACACAGCCCCATAGCCAGCTTCCCGGAATTCGAGGCCAAATTGATTGAAATGCCGCCGTGGTCCGAGGTGCCGCCGGAGAAAGACTCGGAGAATTTGTTGCAGAAATCGGAGGTGAAGTTCTTGAACGAGGTTCAGGGACCAGAGAGCGTTGCTTTCGACCCTCAAGGTCGCGGTCCTTACGCTGGTGTCGCTGATGGAAGGATTCTCTTCTGGAATGGACACTCTTGGCTTCCCTTTGCTTATACCTCTCCCAACAGGTCAGAATTGTGTGATCCTAAAGTACCTGCATCACCACTTAGCTATGTGACGACCGAGCACATCTGCGGAAGGCCTTTGGGACTCAGGTTCAACAAGAAAACTGGCGATTTATACATTGCGGATGCATATTTTGGGCTTCTGAAGGTGGGGCCTGAGGGTGGTTTAGCAACACCTCTTACAACTGAGGCTGAAGGGGTGCCATTCAGGTTTACCAATGATGTTGATGTTGACGAAGAAGGGAATGTTTATTTTACGGATAGCAGTGCGAAATATCAGCGCAGGAACTTTATTCAACTGGTATTTGCTGGAGATGATAGCGGCAGAGTTTTGAAATACAACCCTGACACTAAGGAAACCACAGTTCTTGTGAGAAACATTCAATTTCCAAATGGCATTTCCTTAAGCAAAGATCGTTCCTTCTTTTACGTCTGTGAAGGTGTTGTTGGCAGGCTACGCAAATACTGGCTGAAAGGCGAAAAGGCCGGGACTTCAGAGATCATAGCCATCCTGCCTGGAATCCCTGACAATGTGAGAGTCAATGAAGATGGCGATTTTTGGATTGCACTTCATTGCCGAAGGTATATGTATGCGTACCTTAATGCCCTCTATCCAAATATTCGGAAACTCATACTCAAGCTCCCTATACCAACAAAGATTCACTACCTGCTTCAAATTGGTGGCCGGCAACATGCGTTGGCTGTTAAGTACAGCTCCGAAGGCAAACTTCTGCAGATATTGGAAGATAGCGAGGGAAAAGTTGTTAGAGCAGTGAGTGAAGTGGAGGAGAAAGATGGTAAACTATGGATGGGAAGTGTTCTTATGCCTTTTATTGGAGTTTACAACTTGAAATGA 1182 0.4687 MTLLRWLAILFLLLAVYCGLDPFRHSPIASFPEFEAKLIEMPPWSEVPPEKDSENLLQKSEVKFLNEVQGPESVAFDPQGRGPYAGVADGRILFWNGHSWLPFAYTSPNRSELCDPKVPASPLSYVTTEHICGRPLGLRFNKKTGDLYIADAYFGLLKVGPEGGLATPLTTEAEGVPFRFTNDVDVDEEGNVYFTDSSAKYQRRNFIQLVFAGDDSGRVLKYNPDTKETTVLVRNIQFPNGISLSKDRSFFYVCEGVVGRLRKYWLKGEKAGTSEIIAILPGIPDNVRVNEDGDFWIALHCRRYMYAYLNALYPNIRKLILKLPIPTKIHYLLQIGGRQHALAVKYSSEGKLLQILEDSEGKVVRAVSEVEEKDGKLWMGSVLMPFIGVYNLK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01478 393 Pfam Strictosidine synthase-like, N-terminal 65 94 - -
Aip03g01478 393 SUPERFAMILY Calcium-dependent phosphotriesterase 41 392 - -
Aip03g01478 393 Pfam Strictosidine synthase 182 269 IPR018119 GO:0009058|GO:0016844
Aip03g01478 393 Gene3D - 53 393 IPR011042 -
Aip03g01478 393 PANTHER STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 8 392 - -
Aip03g01478 393 PANTHER STRICTOSIDINE SYNTHASE-RELATED 8 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01478 Aip-Chr3 16248455 16252268 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01478 - - gmx:100803331 665.996