Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01461 ATGATGAGCAACATGATCCAAAATCAAAGCATGCTACCACCATTGATGAAGATAGAAGAAGATGAAAGCATGGTGAAGCTGAAGCAAGGCATAGTCACCATTTTAACACCCTCCTCTGCTTCTTCCTTAAGGAGGACACTCTCTGCTGACATGTCCTCCAAGAAATGGATGCATGATCTTCAACAACAACAACAAGAGGAAAAAGATAACCAAGATTCCTTCAAGATGAAGAAGATCGCTTCGTCGGAGGAGCTCACGCAACACCTTCCCAATAATTCATATTCTTCTTCTTCTTCTTCTGACGAAGGAGAAGAAGAGGAGGAGGAAGCAGAAAGGGAGAGGCTCGCCATTTGGAGCTCGATCCTTAAGAACAAGAAAGAGGAGCAAGAGAAATCCAGGGGAGGGTTCGACACATGGGGATCAATCATGTCCATGAAAAGCGACAGCGACGGCAACAGCAACAACAAGAACAATCAGAGCCTTGAAATGACGAAATCGTTGCCGGTGAGTGTGACGGTTACACCTTATGTTCATCCTCTTGTGAAGAGATCGAAGAGCTCTCTCAGTGATAAGAGCCTTGAAATCTGCACTGAGAGTCTTGGATCAGAGACTGGCTCTGATTCCTTGCTCTTCTCTTCTTCATCTTCTTCTTCTCCTTCTTTCCCTTCAGGGGAATCAGAGAAGGTAGTGAAAGAATCAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAAGAGAACATCCATGCTGCTGCAATAACAAAGAGTAAGTTGTTATCGCATCCAAGGTGTTTTCCTCCACCACTTCCTTCACTTTCTTTCCGTGGTTGCAATAAGAACAAGGAAGATTCTTCTTCTTCTTCCTCTTCACTGCACATGAAGCCGCACCGTGACAATGGAAGGTTGGTTCTTCAAGCTGTGTCACTCCCTTCAAACAACAACTTCAACGCTCAACGCCAAGACGGTCGTCTCGTCCTCACTTTCGCCAATGATCAGGAAGTTCCCGAAGTCGAAGAAGAGGAGAATTATGATGATGAAGGTATGGAGGAAGAGGAGGAGTTTGAAGAAGAAGAAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAAAGTGAAGTTGTTATGGAGAAGAAAGCGCCATTAATGTCAAGTGGGATTACTACTACTACCACTACTACTATTAATAGTGGCGGTGGTAATCTTCATAGGCTAACATTGATGATGAACAACAACAGCAACAACAACAACAAAACAATTGGGTTGGTGAATAGAAACATGAATCCAAATTGGTCAGACAAGTTCAACAAGAAAGGGATGAACATGAATTTGGAGGATGTGAATGTTAGTGTTGTTGCAAGGTTGATTCCTTCATCACCAGGATCAGCAACATCACCACCACCACCTTCTTCTTTCAATCTCAATGCCTATGAATACTTTTGGAAGACACCAAAACCTTCTTCTAAGCTTCCAAACAACAACAGCAACAACAACAACAATGAGCAACACCAACAGTTGCTGGTGCTAAGAGCCAAGAATGGTGACTACTTGGTTCACAATTTCAAGGGCTGCAAGGATTCTAGAAGGTCCTTGCTCTTCTGGGAACCTTATTGCATTGCCACTTCCTGA 1647 0.4323 MMSNMIQNQSMLPPLMKIEEDESMVKLKQGIVTILTPSSASSLRRTLSADMSSKKWMHDLQQQQQEEKDNQDSFKMKKIASSEELTQHLPNNSYSSSSSSDEGEEEEEEAERERLAIWSSILKNKKEEQEKSRGGFDTWGSIMSMKSDSDGNSNNKNNQSLEMTKSLPVSVTVTPYVHPLVKRSKSSLSDKSLEICTESLGSETGSDSLLFSSSSSSSPSFPSGESEKVVKESEQEQEQEQEQEQEQEENIHAAAITKSKLLSHPRCFPPPLPSLSFRGCNKNKEDSSSSSSSLHMKPHRDNGRLVLQAVSLPSNNNFNAQRQDGRLVLTFANDQEVPEVEEEENYDDEGMEEEEEFEEEEEEDEEEEEEEEEEEEESEVVMEKKAPLMSSGITTTTTTTINSGGGNLHRLTLMMNNNSNNNNKTIGLVNRNMNPNWSDKFNKKGMNMNLEDVNVSVVARLIPSSPGSATSPPPPSSFNLNAYEYFWKTPKPSSKLPNNNSNNNNNEQHQQLLVLRAKNGDYLVHNFKGCKDSRRSLLFWEPYCIATS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01461 548 Coils Coil 226 251 - -
Aip03g01461 548 Coils Coil 343 386 - -
Aip03g01461 548 MobiDBLite consensus disorder prediction 330 383 - -
Aip03g01461 548 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 22 547 IPR021410 -
Aip03g01461 548 MobiDBLite consensus disorder prediction 112 134 - -
Aip03g01461 548 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 22 547 - -
Aip03g01461 548 MobiDBLite consensus disorder prediction 142 170 - -
Aip03g01461 548 MobiDBLite consensus disorder prediction 84 99 - -
Aip03g01461 548 MobiDBLite consensus disorder prediction 60 82 - -
Aip03g01461 548 MobiDBLite consensus disorder prediction 53 170 - -
Aip03g01461 548 MobiDBLite consensus disorder prediction 336 379 - -
Aip03g01461 548 MobiDBLite consensus disorder prediction 202 298 - -
Aip03g01461 548 MobiDBLite consensus disorder prediction 202 224 - -
Aip03g01461 548 MobiDBLite consensus disorder prediction 280 296 - -
Aip03g01461 548 Pfam Fantastic Four meristem regulator 268 331 IPR046431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01461 Aip-Chr3 15875559 15877973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01461 - - ahf:112789545 748.429