Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01427 ATGAGTGAGAGTAACAGCAACAGCAACGGGGCGAACAAGGCTGCTCCCACGAAGCTGCTCCTCTACTACTTCGAGATTTATGTGAAGGACGCCGGCGCCAAGGGCCAGATTGCCATCGGCTTCACCTCCGAGTCCTTCAAGATGCGTAGGCAGCCCGGGTGGGAGGCCAATAGCTGTGGATATCACGGGGATGATGGGCTTCTTTATCGTGGACATGGCAAAGGGGAACCCTTCGGCCCTACCTATACATCTGGCGATATTGTTGGCGCTGGAATCAACTATGCTGCCCAGGAATTCTTCTTCACGAATTTAATTTTACAGGACTGTGTTTCATTTATCTCTGACAGGGTGCATGTCAACTTTGGGCAGAAACCATTTACCTTTGACCTAAAGGAATTTGAAGTGCAAGAAAGAATGAAGCAACAACTGAAAATAGAGGAATTGCCTCTGACATCAAATGTTAGTTACGGAATTGTCCGTTCTTACCTGCTACACTATGGCTACGAAGATACCTTGAATTCATTTGATGTGGCTAGTAGAAGTACTGTTCCTCCTATATATATAGCTCAGGAGAATGGGGTTGATGAGCAGGAAATAATGTATGCATTGAATCACCGAAAGACTCTCCGGCAGCTAATCAGGGATGGGGAGATTGATACTGCATTTGGTAAATTGCGAGAATGGTATCCCCAGATTGTTGAGGACAATACATCAGCTATGTGCTTTCTGCTTCATTGTCAGAAGTTTATTGAATTAGTTCGGATTGGAGCATTGGAGGAGGCTGTCAAATATGGAAGAATAGAGTTGTCAAGCTTTTTTGGGTTGCCTGTCTTTGAGGACCTAGTTCAGGATTGTGTTGCTTTGTTGGCATACGAACAACCACTGGAATCCCCTGTAGGATATCTTCTAAAAGACTCTCAACGTGAAGTTGTAGCTGACACAGTCAATGCGTTGATCTTGTCGACAAATCCCAACATGAAAGAGTCCAAAAATTGCTTGCACTCGTATCTTGAGAGGTTACTTAGACAGCTAACTGCTTGTTGCTTGGAGAATAGATCTTTGAGTGGGGAGCAGGGAGAAGCTTTCCAACTTCATAGAGTGCTTAGCAGTGGTAAAAGAGGCTAG 1125 0.4498 MSESNSNSNGANKAAPTKLLLYYFEIYVKDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGHGKGEPFGPTYTSGDIVGAGINYAAQEFFFTNLILQDCVSFISDRVHVNFGQKPFTFDLKEFEVQERMKQQLKIEELPLTSNVSYGIVRSYLLHYGYEDTLNSFDVASRSTVPPIYIAQENGVDEQEIMYALNHRKTLRQLIRDGEIDTAFGKLREWYPQIVEDNTSAMCFLLHCQKFIELVRIGALEEAVKYGRIELSSFFGLPVFEDLVQDCVALLAYEQPLESPVGYLLKDSQREVVADTVNALILSTNPNMKESKNCLHSYLERLLRQLTACCLENRSLSGEQGEAFQLHRVLSSGKRG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01427 374 Gene3D - 2 142 IPR043136 -
Aip03g01427 374 SMART ctlh 202 260 IPR006595 -
Aip03g01427 374 SMART SPRY_3 19 125 IPR003877 GO:0005515
Aip03g01427 374 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 202 260 IPR006595 -
Aip03g01427 374 SMART toby_final6 256 357 IPR013144 -
Aip03g01427 374 Pfam SPRY domain 22 103 IPR003877 GO:0005515
Aip03g01427 374 Pfam CTLH/CRA C-terminal to LisH motif domain 204 346 IPR024964 -
Aip03g01427 374 PANTHER RAN BINDING PROTEIN 9-RELATED 9 372 - -
Aip03g01427 374 PANTHER RAN-BINDING PROTEIN M HOMOLOG 9 372 - -
Aip03g01427 374 ProSiteProfiles B30.2/SPRY domain profile. 1 150 IPR001870 -
Aip03g01427 374 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 126 IPR013320 -
Aip03g01427 374 CDD SPRY_RanBP_like 11 122 IPR044736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01427 Aip-Chr3 15001848 15007652 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01427 K23334 - gmx:100805319 627.861