Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01412 ATGATGAACCAATTCGATGATTTGAAACATTTTGCAGGCGCAACATGCAAATACGTTTCAGTCCTCCATTCCAAACCCATATCCGAGGAGGCTTCCTCAGCATTGGAAGCTCCTCTGCTTGCTGACACTGATGATACCGTAAACGGCGCCGTTGACTACAAGGGACGACCTTCCATCAGATCCAAATCTGGCTCTTGGAGATCTGCTCGCTTTATCATAGGTGTTGAGGAGAGGGTGGCATTCTATGGGATTCAGGGGAACCTGATATCGTATCTTACAGGGCCGCTGCAGCAGAGCACGGCGGCCGCAGCCGAAAATGTAAACATATGGTCGGGAGCATCCTCCCTGCTTCCCCTCTTTGGAGCAATCGTCGCCGATTCCTATCTTGGACGCTACCGCACTATCATTCTCGCCTCCCTCGTCTGCATTTGGAAACTGGGATCATGCGCAACTGAAACTCAAGTAATCTTGTTCTTTATCTCACTTTATCTGGTGGCCATTGGACAAGGTGGACATAAGCCCTGTGTTCAGGCATTTGGAGCCGATCAATTTGATGAACAGCATCCGAAGGAGCTCAAGGATAGAAGCTCGTTCTTTAACTGGTGGTATTTCACAATGTGTGCAGGTTGCATGGGAACTCTTTGGATTTTGAACTATATACAGGACAACCTTAGTTGGGTCGTTGGATTTGGAATCCCTTGTGCGGTGATGATCATTGCATTGCTTGTTTTCATTCTTGGAACATGGACCTACAGGTTTAACGTCAAGGGCCATGGCAAGAGCCCTTTTCTCAGAATTGGTCGTGTCTTTGTTACAGCTGCGGGAAATCGGCAAGCAGAAACCATCCAAGAGGAAACTAGTGGAACACTCCCTCCTCAAATTTCCCAACAGTTCAACTTCCTCAACAAAGCATTATTAGCACCAGACTGTTCCATCAAAGAAGGGAATGTCGCGGGTAGCGTCGTGGAGGTGGAAGAAGCAAAGGCAGTACTAAGGCTGGTTCCTATTTGGGCAACAACTCTGCCGTTCGCTATTGTGTTTGCTCAAGCCCCTACCTTCTTCACGAAGCAAGGATTTACGTTGGATCGCACCATATTTCCGGGCTTTGACATACCTGCTGCTTCTCTTCAAACGCTTATTGCACTTGCCATTGTTGTCATCAGTCCCATCTATGACCGCATATTTGTGCCAATAGCTAGAGCCATCACCAGGCAACCCTCCGGCATCACAAAGCTACAAAGAATTGGGATTGGGATTTTTATATCGATATTTAATGTAATATTTGCGGCTCTTGTTGAGATGAAAAGACTGCAAACAGCACAAGAGTTTGGTCTTGTTGATGAACCGGATGCAACCATTCCCATGAGTATGTGGTGGTTGATTCCCCAGTACCTCTTGCTTGGAGCTGCAGAAGTTTTCACCATGGTTGGTCTGCAGGAGTTTTTCTATGATCAGGTTCCCGATGAACTACGAAGCATGGGTCTTGCTCTGTACTTGAGCATCTTTGGTGTGGGAAACTTTCTAAGCGGCTTTCTGATTTCGGTTATTGAAGGAGTGACAGGCAGCGATGGACATGACAGTTGGTTTGCTGATAATCTGAATAAGGCGCATCTTGATTACTTCTACTGGCTACTTGCTGCCCTTAGTGTCATCGGATTTACTCTCTTCATTTGCTTTGCAAAATCCTACGTTTATAATCACAAACGGATTTCTCGAGGATAA 1722 0.4646 MMNQFDDLKHFAGATCKYVSVLHSKPISEEASSALEAPLLADTDDTVNGAVDYKGRPSIRSKSGSWRSARFIIGVEERVAFYGIQGNLISYLTGPLQQSTAAAAENVNIWSGASSLLPLFGAIVADSYLGRYRTIILASLVCIWKLGSCATETQVILFFISLYLVAIGQGGHKPCVQAFGADQFDEQHPKELKDRSSFFNWWYFTMCAGCMGTLWILNYIQDNLSWVVGFGIPCAVMIIALLVFILGTWTYRFNVKGHGKSPFLRIGRVFVTAAGNRQAETIQEETSGTLPPQISQQFNFLNKALLAPDCSIKEGNVAGSVVEVEEAKAVLRLVPIWATTLPFAIVFAQAPTFFTKQGFTLDRTIFPGFDIPAASLQTLIALAIVVISPIYDRIFVPIARAITRQPSGITKLQRIGIGIFISIFNVIFAALVEMKRLQTAQEFGLVDEPDATIPMSMWWLIPQYLLLGAAEVFTMVGLQEFFYDQVPDELRSMGLALYLSIFGVGNFLSGFLISVIEGVTGSDGHDSWFADNLNKAHLDYFYWLLAALSVIGFTLFICFAKSYVYNHKRISRG 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01412 573 Pfam POT family 151 526 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aip03g01412 573 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 50 569 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aip03g01412 573 SUPERFAMILY MFS general substrate transporter 82 561 IPR036259 -
Aip03g01412 573 Gene3D MFS general substrate transporter like domains 39 572 IPR036259 -
Aip03g01412 573 CDD MFS_NPF5 66 565 IPR044739 GO:0042937|GO:0042938|GO:0071916
Aip03g01412 573 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT-LIKE PROTEIN 50 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01412 Aip-Chr3 14810394 14813483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01412 38 570 Organic Solute Cotransporters AT1G22540 60.215 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01412 K14638 - gmx:100776720 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01412 03 14810394 14813483 Aip03g01412 03 14810394 14813483 ECH