Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01393 ATGAGAATGGCGAATTTGAAATACCTGAGTAGGAGAGCGTTGCTTGGGTGGAGTTGGAAGGTAGAAGGAAGCAGTTATCGGCTTTATTCGAAGGCAAGCACTGCCTCTGCTGCTACGACAGATGACCGCGGTGAAGGTGAGGATGCTGCTCCCACTTCGGGGATCTGTAGGCCGCTCTCGGAGATACTGAAGGAGCTTAATAAGAAAGTCCCCGATTCTCTCGTCAAAACCCGTGTTGAGTCCGACGGATTTGCCATCCGATACATTCCCTGGCACACTGTCAACCGCATTTTAAACTTACACGCTCCAGAGTGGTCTGGTGAAGTTCGCAACATCTCCTACTCCGCCGACGCCAAGTCTGTCTCTGTTGTCTACCGCATTACCCTCTATGGCACTGATGCTGAGATATTTAGAGAATCAACTGGTACTGCTTCAATAGATGACACAAGTTATGGAGATCCTGTACAGAAGGCAGAAGCAATGGCTTTTCGTAGAGCTTGTGCACGCTTTGGCCTAGGACTCCATCTTTATCATGAAGATGTATCATGA 549 0.4882 MRMANLKYLSRRALLGWSWKVEGSSYRLYSKASTASAATTDDRGEGEDAAPTSGICRPLSEILKELNKKVPDSLVKTRVESDGFAIRYIPWHTVNRILNLHAPEWSGEVRNISYSADAKSVSVVYRITLYGTDAEIFRESTGTASIDDTSYGDPVQKAEAMAFRRACARFGLGLHLYHEDVS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01393 182 Pfam Rad52/22 family double-strand break repair protein 60 180 IPR041247 -
Aip03g01393 182 Gene3D DNA repair protein Rad52/59/22 57 182 IPR042525 -
Aip03g01393 182 PANTHER DNA REPAIR RAD52-LIKE PROTEIN 1, MITOCHONDRIAL 30 181 - -
Aip03g01393 182 PANTHER - 30 181 IPR037489 GO:0000724|GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01393 Aip-Chr3 14484739 14486206 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01393 - - adu:107477634 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01393 03 14484739 14486206 Aip03g01393 03 14484739 14486206 ECH