Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01390 ATGAAGATCGTTCCCACATTAGTGCAAAAGTTCATAGAAGTGTTGTTGTGGGCAAGGCAAGTTGTTAGTAGAAAGATGAGGGGGAAACCAGCTTCAGGAAAGGCCATATTTGTTTTAAATAATTTGCTGCCTCTTCCCAAACCTCGTGACTGTGACCATAAACGAAAGTTGATTGAAGGCAGAGCTGGTGATGTAATGGAGGAAGTGTCAAAGACCCATCAAGCTATCAAGTCGCTGGACAAGGCAGTTTCAACGTTGGAAATGGAGCTGACAGCAGCTCGGAGAAGTGAAAATAGTGGGGAGCAGTTGAAGAGGCAAGAGGGTGGTTTACAGAAAGCTTTTGTGGTGATTGGAATCAACACAGCGTTCAGCAGCAAAAAGAGAAGAGAGTCGATACGGGAAACATGGTTACCGAAAGGAAGCGAGCTTAAGGAACTGGAGAAAGAGAAGGGGATTGTTGTGAGGTTCATGATAGGCCACAGCACCACTGCAGGTGGCATTCTCGATAAAGCAATTGACGCAGAAGAGGCTCAACACAATGATTTCTTGAGGCTCGACCATGTTGAGGGCTACCATGAGCTTTCTACCAAGACTCGCCTCTTTTTCTCCACTGTTGTTTCTTTGTGGGATGCTGATTTCTATGTCAAGGTTGATGATGACATCCATTTAAATCTTGGCATGCTAGTGAGTACCCTTGCTAAGTACAGATCAAGACCTAGGGTTTATATTGGCTGCATGAAATCCGGTCCAGTTCTATATCAAAAAGGGGTAAAGTATCATGAGGCTGAGCACTGGAAGTTTGGAGAAGAAGGGAACAAGTATTTCAGGCATGCCACTGGCCAAATATATGCCATCTCCAAGGATCTTGCTACATATATCTCCATCAACTGGCCCATATTACACAGATATGCAAATGAGGATGTCTCTTTAGGGTCATGGTTATTGGGCCTAGAAGTTGAACATATCGATGAACGCTCTATGTGTTGTGGGACACCTCCTGATTGTGATTGGAAGGCAAGGACAGGAAACGTGTGCGTGGCATCTTTTGATTGGTCTTGCAGTGGAATATGTAAATCGGTGGAGAGAATGAAAGATATACACAAAGCTTGTGGGGAAGGAGATGGAGCTGTTTGGAACGTTGACCTCTAA 1149 0.4456 MKIVPTLVQKFIEVLLWARQVVSRKMRGKPASGKAIFVLNNLLPLPKPRDCDHKRKLIEGRAGDVMEEVSKTHQAIKSLDKAVSTLEMELTAARRSENSGEQLKRQEGGLQKAFVVIGINTAFSSKKRRESIRETWLPKGSELKELEKEKGIVVRFMIGHSTTAGGILDKAIDAEEAQHNDFLRLDHVEGYHELSTKTRLFFSTVVSLWDADFYVKVDDDIHLNLGMLVSTLAKYRSRPRVYIGCMKSGPVLYQKGVKYHEAEHWKFGEEGNKYFRHATGQIYAISKDLATYISINWPILHRYANEDVSLGSWLLGLEVEHIDERSMCCGTPPDCDWKARTGNVCVASFDWSCSGICKSVERMKDIHKACGEGDGAVWNVDL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01390 382 Pfam Domain of unknown function (DUF4094) 48 95 IPR025298 -
Aip03g01390 382 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 40 373 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aip03g01390 382 Coils Coil 76 96 - -
Aip03g01390 382 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 8-RELATED 40 373 - -
Aip03g01390 382 Pfam Galactosyltransferase 127 323 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aip03g01390 382 Gene3D - 103 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01390 Aip-Chr3 14430725 14434512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01390 50 382 Glycosyltransferase AT1G77810 68.468 1.16e-176 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01390 K20855 - gmx:100776291 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01390 03 14430725 14434512 Aip03g01390 03 14430725 14434512 ECH