Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01339 ATGTCGTTTCCACCTTCCAACAACAATACCCAGAACCAGAATCAGCATAATGCGATTATAAAGAACCCTAACCCTAACAATTTCCCAATTTCTTCTCCCACAAAGAAGAGAGCTTCAAGGTGGTCCGATATCTGGCTCAAGACCAACACCAACGCCAAGAATAATAATCCCCTCAACTCCATGGTCGTTGCTATGCAGCTTCACTCTCTCTCTTCTTCCCCCAAACACCCGAAATCGATTCCCAATTTCTCAATCATGGACCGAACCCTACTCTTATCCGACGAGCTTCTTTTGAAGATCCTCGCCAAGCTTCCAGATTCTCAGAGGAACTCAAATTCCCTCGTTTGCAAGCGGTGGCTCAACCTCCAGGGTCGACTCGTTCGTTCCCTCAAGGTATTGGACTGGAACTTCCTCTTGTCTGGTAGGTTGATTCACAGGTTCCCGAACCTAAATCACGTTGATTTGGTCTCTGGGTCTTTGATTTCTCCGAGAAATTCCGGAATTTGTTTGAGCCATCGTAATCTTTCCATGCATGTTGATTCTGGGTCTTCGCCAAGTTGGTGTTTTGGTGAGGAGAATTTGCTCCCTGTTGAGGTCATTGACAATGGCCTAATTGCTCTTGCCGGTGGCTGCCCCAATTTGCGCCGGCTTTCGGTGATCGGAGCCAGCGAGATGGGCCTGCTGAGTGTGGCTGAGGAGTGTTCCACATTGCAGGAGCTTGAGCTGCAGAGGTGCAGTGACAATGTACTTCGAGGGATCGCGGCTTGCGCGAATTTGCAGATCTTGAAACTTGTGGGGAATGTTGATGGTTTGTACACTTCAGTTGTGTCTGATATTGGGTTAACCATTTTGGCTCAGGGGTGTAAGAGGCTGGTGAAGCTTGAGCTAAGTGGGTGTGAAGGTAGCTTTGATGGGATCAAAGCCATTGGCAAGTGTTGCCAAATGTTGGAGGAGTTGACTTTTTGTGATCACAGGATGGATGATGGGTGGTTGGCAGCACTCTCATTTTGTGAGAATTTGAAGACACTGAGGTTCCAGTCTTGCAAACGGATCGATCATAATCCAGGTTTAGAGGAGTATTTGGGTTCTTGCGAGGCACTCGAACGGCTTCATTTGCACAAATGCCAGCTGCGCGACAAGAAGAGCGTTGCGGCCATGTTTTCCGTGTGCAGGGCTGCAAAGGAGATCATTATTCAGGATTGTTGGGGATTGGACAATAGCATGTTTAGCTTCGCAAATGTTTGCAGGCGGGTAAAATTGTTGTACTTAGAAGGATGCTCAATGCTAACAAATGAAGGTTTGGAATCTGTAATCCATTCTTGGAAGGAGCTTCAGAGCCTTAAAGTAGTGTCATGTAAGAACATAAAGGACAGTGAAATCTCTCCTGAACTAGCAACCTTATTCACCACTCTCATAGATTTGAAATGGAGGCCAGACACCAAATCACTTCTTCCATCAAGTCTTGCCGGAATAGGCATGGGTAAGAAAGGTGGTAAATTTTTCAGGAGGGTGTGA 1515 0.4673 MSFPPSNNNTQNQNQHNAIIKNPNPNNFPISSPTKKRASRWSDIWLKTNTNAKNNNPLNSMVVAMQLHSLSSSPKHPKSIPNFSIMDRTLLLSDELLLKILAKLPDSQRNSNSLVCKRWLNLQGRLVRSLKVLDWNFLLSGRLIHRFPNLNHVDLVSGSLISPRNSGICLSHRNLSMHVDSGSSPSWCFGEENLLPVEVIDNGLIALAGGCPNLRRLSVIGASEMGLLSVAEECSTLQELELQRCSDNVLRGIAACANLQILKLVGNVDGLYTSVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFCDHRMDDGWLAALSFCENLKTLRFQSCKRIDHNPGLEEYLGSCEALERLHLHKCQLRDKKSVAAMFSVCRAAKEIIIQDCWGLDNSMFSFANVCRRVKLLYLEGCSMLTNEGLESVIHSWKELQSLKVVSCKNIKDSEISPELATLFTTLIDLKWRPDTKSLLPSSLAGIGMGKKGGKFFRRV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01339 504 SUPERFAMILY RNI-like 276 459 - -
Aip03g01339 504 MobiDBLite consensus disorder prediction 1 35 - -
Aip03g01339 504 SUPERFAMILY F-box domain 84 139 IPR036047 GO:0005515
Aip03g01339 504 Gene3D Ribonuclease Inhibitor 86 303 IPR032675 -
Aip03g01339 504 Gene3D Ribonuclease Inhibitor 304 477 IPR032675 -
Aip03g01339 504 SUPERFAMILY RNI-like 133 267 - -
Aip03g01339 504 SMART LRR_CC_2 364 389 IPR006553 -
Aip03g01339 504 SMART LRR_CC_2 211 236 IPR006553 -
Aip03g01339 504 SMART LRR_CC_2 288 312 IPR006553 -
Aip03g01339 504 SMART LRR_CC_2 415 440 IPR006553 -
Aip03g01339 504 SMART LRR_CC_2 256 287 IPR006553 -
Aip03g01339 504 PANTHER UNCHARACTERIZED 69 485 - -
Aip03g01339 504 PANTHER F-BOX PLANT-LIKE PROTEIN 69 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01339 Aip-Chr3 13705536 13708088 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01339 K10268 - gmx:100812193 713.761