Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01309 ATGGGATTCGATAATGAGTGCATTGTCAACATTCAATCACTTGCGGGAGAGTACTTCTGTCCAGTTTGTCGCCTCCTTGTGTACCCAAGCGAGGCTATGCAGTCACAATGCACTCACTTATACTGCAAACCATGCTTGACATATGTAGTGAGCACAACGAGAGCTTGCCCATACGATGGTTACTTGGTCACTGAGGCGGATTCTAAGCCTCTTACAGAGTCGAATAAGGCACTTGCTGAAACTATTGGAAAAATACCTGTTCATTGCCTATATCACAGGAGTGGATGCACATGGCAAGGAACGTTGTCCGAGTGTACATCACATTGTTCTGGATGTGTTTTTGGCAATTCACCTGTTGTTTGCAATAGGTGTGGAATCCAAATAGTGCATCGACAAGTACAAGAGCATGCACAAAGTTGTCCTGGTGTGCAAAGTCAGGCACAGCAGGTTGCCGTTACCCAGGAACCTTCAGCCACCAGCACAGTTGCCTCTACTGATCAGAACCAGACTGCTGCTCCAGTTGGAGCTGTGGCTTCACAAGCTTTGAATTCTCAAACCGCTGTTACAACAACTACATCTGGGCAGGATTCGAGTCAGCTACCTAACCCAGCATCTCAATCTCAACCAACGCAGAATGTTCAGACTGCTGCACCAACTGCAGAGCAATGGTATCAGCAGCAACAATATCAACAATACTACCTGCAATACCCTGGTCAAGATCCTTATCAACAGCAGTATCAACATTACTACCCTTATCAACAACCAGTAGGTCCACAGTACCAGCAGCCCTACAGCCAGCCCCAACCTCAGTCTCAGTCCCAGCCCCAGTCCCAGCCCCAGCCTCAGCCACAAGCCCAACACCAAGTGCAGCCTCAGCCACAAGCCCAACACCAAGTGCAGCCTCAGCCACAAGCCCAACACCAAGTGCAGCCTCAACTTCAACCGCAGGGAGTTTCTAATCCGCTTCCACAAGTTCCGGCTCCTGTGGCTCCGCAACCACAGAATCAGATGCAAGTTAACCAACAACAGCAGCAGCTTCAACCTGCTGTAACGCCACATGGTCAGATTCTGCCACAGAGTAATCCACCGGGTCTCACCCAAGCACTCTCTCAGCCTCAGTCTTCATATCCTTACCCCCTAGTTCCTCATGCTGTCCAGCCTCACCCTCAACCTCAGCAACATATGCAAATTCCTCCTTATCAGCAGCCTCACTCTCAAGCTCAGCATTCACAGCCTCAAATTCAACAGCCAGCTCAGAAGTATCCTGTTTCTCAACCTCAAGTTCATTCACAAGCACACCCTAATGCTCCAGTTCAACATCTTTCTCAGTCCCAAATGCGTCCTCACCAGTCCCTAACTCCTAGTGTCCAACCTCAAGGACAAAATGCATCGTCAAATGCAGTAACAGGCTTTCAATCTTATCCACAACCACAACCTCAACTTCACCAGAGTACTCAGCCAGGAGCTCCTCAACATGGTATGCAGATGCATGCTCAAAGTGGGCCTCTGCCTCATGCTCAGCATCCAGTCCTGATGCAGAATCAGTTTCCTCAGCAAATTCCAGTGATGTTTTCTAATCAGCAACAGCCAGCTTTATTGCCTTCACCTGTTCAAGGCCAAGGTACCCCTCCTATCCAACAGCCGCCGGTTTATAATCCCAATCAACAACCTGGCCCAATTAACCACCGTCCTACCCTGCAACCAGTTCAACAAAGTTTGGCTCAGCAACCTTTTGCACACATGCCCATGTCTTCTCATTTACGACCTCAAGGTCCAGGACATTCATTTCCCAGGCATTCTTTTCCACCCGCACAAGGTAATCCTGCACCGTTAAATAGCACTCAGCTCAGTCAATCCCAAAATGCTGTTGGAAAACCTTCAATCCCCAATCATCCAATACAAATACAGCCATTTGCACACACTGCTAATAACATTCCAGTTAGACCAGGGCAAACTGGTTCCAGCCACCTGCCTGAAAACCATAATTTGTTGGTTGGGACCAATAATCAAGTGCAGTTGTCTTCTGATTTGCAGTCTGGGGCTCCAGCACCTCATGAAAGGCAAGGCAATGCCACTGAACAGCACAGTGACTCTGCCACTGGGAAACTTGCTAAAAATTCTAAAGATTTTTATACAGCATCGTTATCAGAAAATGAGTTGAAATCTGAAAAGGTCAAAATGGATATAAAGCCTATTGATGCTGGGAACAAGCAAAATGGTGGAGATCAAAATGCCGTGAAAACTTCAGGCCCAAATGTCAATTCATTAGAAAATGGTGATTCAGTGGGTCAGAGTGTTGGTAAGGAAGAGGTTGCTGAAAATAACGGTAATGAGCATTCTGCTCCCAAGGGCAATGAGAATCAAGATGGTCCTCTGCTGAAGATGGAAACCAAGAAAGAGTCTGAAACTGATGAAGTGAATAATGATGATGCACACACTTCAAGACCTGCTGCTGATCATGGTAAGCAACATCAGCCAATGACTGAATATGCTGCTGTCCAGCAGAGGTCTTCTGCAATGTTAGGATCACAGGTGCTACGTCCAGCAGGGCCAAATGATCCTCTCCCTTCTGGACACTCTTCTACTTTTGTCAGGAATCATGTACCTACCCATGATCCTCATTTGGGACAGGCAACCATGTTAAAGCAGCCGCAAGGTATTGGCATCCAATTTGGCACACCAGGGCAAAACTTTCAACCTCAGTCTCTTGGACCTGCAGCGCCATATAATCAAGGTCAGGAACCTCCTTTTCATGCTGGTGCATCTAATTCATCTCGTATTGGAGGGCCACGATTTAGTGCACAACCTTCTAGAGATATGCACGGTGGGTTGACTGCCAATATGCTAGTACATGCTCCTGATGATTTTGTTCCTAGATATGGAAATCATTCATTTGATCCACTCGAGGCAGGGAAGAGACCAGTTGGTTTCCATGATGAGGCCATTAACAAATCAGGTGCTACTCTCCACCCTGGTTATCTTGGCCTAGGTCCTGGACATGGGAGACATCACATGGACGGTATGGCTCCCAGAAGTCCTGGTGGTGAATATCCTGATATGCCTCCCCATAGAATGCGGCCCCTCTCTGGTGGGCTTGTTGGTAAGGCAGATATAGATGATTTTGATGGAAGACCTGCACGTCATTTTGGTGAGCCATTTGGCATTGCATTCCATGATAGTCGGTTTCCTCGTCTGCCTGGTCATTTGCATAGAGATGAGTTTGAGGGTTTTGGTAATTTTCGATTGGGTGAACATCCAAGGGATGGTAATTTTATTGGCCAAGATGAATTTGCTGGTCCATTTCAAAGGGGTGAACATTTTGGTCCGCATAACTTTTCAAGGCAATTGCATCAAGGGGAACCTATAGTTTATGGTGCCCATCCTGGCTCTCGAAGTTTTGAATCTTTCAGCAAAGGAAACAGGCCAGGTCATCCGCAGCTTGGTGAACCTGGGTTCAGGAGCAGCTTTTCTCTTCCTGGATTTCCTAATGATGCTGGATTTTTACCAGGAGAAGCCAGGTCATTTGATAATGTGAGAAGGAAGCCTGCTAGCATGGGTTGGTGCCGGATATGTAGAGTTGATTGTGAAACAGTTGAAGGTTTGGACTTGCATTCTCAAACAAGGGAGCACCAGAGGACGGCTATGGATATAGTTAAAAGCATCAAACAAAATGTGAAGAAACAAAAATTAATACCAAGTGAACATTCCTCAGTCAAAGATGGAAACAAGACAAGAAACACTGGTTTTGAGGGTCGAGGAAATAAACATTGA 3771 0.4673 MGFDNECIVNIQSLAGEYFCPVCRLLVYPSEAMQSQCTHLYCKPCLTYVVSTTRACPYDGYLVTEADSKPLTESNKALAETIGKIPVHCLYHRSGCTWQGTLSECTSHCSGCVFGNSPVVCNRCGIQIVHRQVQEHAQSCPGVQSQAQQVAVTQEPSATSTVASTDQNQTAAPVGAVASQALNSQTAVTTTTSGQDSSQLPNPASQSQPTQNVQTAAPTAEQWYQQQQYQQYYLQYPGQDPYQQQYQHYYPYQQPVGPQYQQPYSQPQPQSQSQPQSQPQPQPQAQHQVQPQPQAQHQVQPQPQAQHQVQPQLQPQGVSNPLPQVPAPVAPQPQNQMQVNQQQQQLQPAVTPHGQILPQSNPPGLTQALSQPQSSYPYPLVPHAVQPHPQPQQHMQIPPYQQPHSQAQHSQPQIQQPAQKYPVSQPQVHSQAHPNAPVQHLSQSQMRPHQSLTPSVQPQGQNASSNAVTGFQSYPQPQPQLHQSTQPGAPQHGMQMHAQSGPLPHAQHPVLMQNQFPQQIPVMFSNQQQPALLPSPVQGQGTPPIQQPPVYNPNQQPGPINHRPTLQPVQQSLAQQPFAHMPMSSHLRPQGPGHSFPRHSFPPAQGNPAPLNSTQLSQSQNAVGKPSIPNHPIQIQPFAHTANNIPVRPGQTGSSHLPENHNLLVGTNNQVQLSSDLQSGAPAPHERQGNATEQHSDSATGKLAKNSKDFYTASLSENELKSEKVKMDIKPIDAGNKQNGGDQNAVKTSGPNVNSLENGDSVGQSVGKEEVAENNGNEHSAPKGNENQDGPLLKMETKKESETDEVNNDDAHTSRPAADHGKQHQPMTEYAAVQQRSSAMLGSQVLRPAGPNDPLPSGHSSTFVRNHVPTHDPHLGQATMLKQPQGIGIQFGTPGQNFQPQSLGPAAPYNQGQEPPFHAGASNSSRIGGPRFSAQPSRDMHGGLTANMLVHAPDDFVPRYGNHSFDPLEAGKRPVGFHDEAINKSGATLHPGYLGLGPGHGRHHMDGMAPRSPGGEYPDMPPHRMRPLSGGLVGKADIDDFDGRPARHFGEPFGIAFHDSRFPRLPGHLHRDEFEGFGNFRLGEHPRDGNFIGQDEFAGPFQRGEHFGPHNFSRQLHQGEPIVYGAHPGSRSFESFSKGNRPGHPQLGEPGFRSSFSLPGFPNDAGFLPGEARSFDNVRRKPASMGWCRICRVDCETVEGLDLHSQTREHQRTAMDIVKSIKQNVKKQKLIPSEHSSVKDGNKTRNTGFEGRGNKH 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01309 1256 ProSitePatterns Zinc finger RING-type signature. 37 46 IPR017907 -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 254 507 - -
Aip03g01309 1256 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1A-LIKE 1 932 - -
Aip03g01309 1256 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1A-LIKE 931 1255 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 254 320 - -
Aip03g01309 1256 ProSiteProfiles Zinc finger RING-type profile. 20 59 IPR001841 -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 531 565 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 331 377 - -
Aip03g01309 1256 SUPERFAMILY RING/U-box 13 73 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 382 396 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 732 837 - -
Aip03g01309 1256 SUPERFAMILY TRAF domain-like 84 141 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 902 925 - -
Aip03g01309 1256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 118 IPR013083 -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 541 555 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 1228 1256 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 582 633 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 792 819 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 737 762 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 643 662 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 606 627 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 185 219 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 397 493 - -
Aip03g01309 1256 MobiDBLite consensus disorder prediction 675 704 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01309 - - aip:107632545 1040.8