Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01294 ATGGTTAGCTTTCAGGATGCTAATTATAGGGGTTCTTGGTGCTGTCAGTTAATTCTATTTTTCATCTGGCTTCCTACTTTCCAAGATGTGACAGCACGAGAAACACATGCTGGCGCTAGACAAATTTCTTCCCTGGTAGAGTTAGCTAAGGAACCTATTTCTGGAGAATCTGGGCTCTTTGAGCCCATAGAAATTTCTCCTGCTGTATTGCCAAAATACCCATATCCCACTGAGCCTTTGTCACCAATGTACACTAGTTTCCCTAGTTCCCCAAACAGATATCTACCAGTTTTAACCGGAAAATGCCCTGTAAACTTTTCAGTTTCGGATATATCAAATATCATAGATAAAACAGCATCTGATTGCACCGGAGCACTGGCAGCGCTCGTAGGGAATGTAATATGTTGTCCACAGTTTAGTAGCTTAATCCACATCTTCCAGGGTTTCTTCAACATCAAATCTGATAAGTTGGTTTTGCCAACTGCAGCTTCTGATCATTGTTTTACTGATATCATCAATATTCTATCCAGTAAAGGGTCAAATGGCACAATGCTTCCCACACTTTGCTCCATAAAACCATCGAACCTTACAGGTGGGTCATGCCCTGTGAAGGATGTTTCTACTTTTGAAAAAACGGTTAACACAAGTAAATTACTTGAGGCCTGCAGCACAGTTGATCCGCTAAAAGAGTGTTGTAGACCTGTTTGCCAGCCTGCAATAATGGATGCTGCACTTCAGATTTCTGGAAGGCAGATGATGCTTAATGACAATGGGAATGTGGCTGGTGAAATGAATCACACTGATTATCTTAATGACTGCAAAGGCGTTGTTTATTCATACCTTTCCAAAAAGTTATCATTGGAAGCTGCTAATACTACATTCCGAATACTGTCTGCCTGCAAAGTTAACAAAGCATGCCCTTTGAATTTTAAGGAACCCTCGGAAGTAATGAATGCCTGTCGGAATGTTGCTGCCCCTAGCCCTTCGTGCTGTAGTTCATTAAACACATACATCGCCGGAATACAGCAACAAATGTTAATTACAAATAAGCAGGCTATAATATGTGCAACACTTTTTGGATCTATGTTACGTAGAGGCGGCATAATGACAAATGTTTATCAGCTCTGTGACGTTGACTTAAAAGATTTCAGCTTACAAAGTTTATGTGCAGGATGTCTGCTTGGAAGCTTGCCTCAAGATGTGATATTTGACAATTCATCAGGATTTAGCTTTACATGTGATTTGAGTGACAATGTTGCTGCACCTTGGCCTTCATCATCTTCCATTACATCTGTGTCGCTCTGTGCACCTGAGATGTCCTTACCTGCATTACCAACTTCGGCACTGAAAAATATTGGTTGTAATTCTGGTGGAGTGGGATTTCTTGTGCCTATTTTTTCATTTTTCATCTTCAATGATGCTCTTAATTCGACGACTGGGCAGATTGTAAAGATGAGCTTGGAAGGCTTCCATGGAATTAAACCAGACCTGAGAGCAACAACCATGGAAAAGATCACCTTAGTTGCATTTTTGTTACTAGTATTTTGCTTCACAAACACATATTATGCTCCCAACAGCTATGCTCAACCGGTTGATTGCCTAGCTTCCGATAGAGAAGCTCTAATAGACTTCAAAGATGGGCTTGATGATCCTGCAAACCAGCTTTCATCATGGATGGACAGAAAATGCTGTCAATGGCATGGAATACGCTGTGACAACCGCACGGGAGCCGTTGTTGCAATTGATCTCCCAGGTTCTTATAACAGGTATGGATTGCTTAATCTAAGTGGTGCAGTAAGACCGTCGTTGATGAAACTCAAGTCATTAAGGCATTTAGACTTGAGTCTCAACTCCTTCAATGGTATACCAATACCTGCATTCCTTGGATCACTAGAGAATTTGCAATATCTTAACCTCTCATATGCTGGTTTTCGTGGAAAAATTCCTCGAAATTTCAGAAACCTCTCTCATTTGAAGTCTCTTGATATAAGCAGTGAGGTTTTAAGCTTACATGCTGAAACCCTGAAATGGGTGACTGGTCTTGTCTCTTTGGAACATCTTGCCTTGCGTGGAGTTGACCTTTCAATGGTAGGAACTGATTGGGTTAGTGCAATAAATACACTGCCTTCTTTAGTTGAGTTGCATCTATCTGATTGTAGCCTGCAAGGTCATATTCCGATTCTTCCATCGCTGAATTTCACTTCACTTGCTGTGATGGATCTTAGATCTAACGACATTGTGTCAAAAATACCTGATTGGCTTGTAAATATAACCAGCCTACATCATATTGATATAAGCCATAATCACATGTATGGAAGCATACCACTTGGTTTTGGAGAGATGCCAAATTTATTGTCCTTGAAATTATTGGACAATGAGAATCTGACAGCAAACTGCTCTCAACTCTTCAGGGGAAGATGGGAAAAGACACAAGTTCTCAATTTGGTAGCTAATCAAATATATGGGAAGCTTCCATCTTCTTTTGGAAACTTGACTTCTCTGGTTCACCTTGATCTTTCTGACAATCCTATTGAGGGTGAACTTCCAGTTTCCATCGGTCCCATTCCAGTTTCCAGAGGGTCATTGCAAAAGCTTACCTCTTTGGACCTTGGAGTCAACAGACTCAATGGGACTCTCCCAGAAAGCATAGGACAACTTTCTCAGTTGCAAATTTTAAGTGTCATTGACAATCAGTTAACAGGTGTGATCTCTGAAGCCCATTTCTCAAAGCTAAGTCAGCTTGATACTTTATTGCTGTCTTCCAATTCATTCTTTGTGACTGTTAGCTCCCATTGGATCCCACCATTCCAACTCACCGATCTTGAAATGGGTTCATGTGTTCTAGGGCCTTCTTTTCCTGCTTGGTTGAAATCACAAAATAAGGTTGATTACTTAGACTTCTCAAATGCTGGCATTTCTGGTTTTGTGCCAAATTGGTTTTGGGATATGTCATCTAATATGTCATATTTAAACATTTCCCATAATGAATTACAGGGAAAGCTTCCAACTCCAATACCTATTGCACAATTTACTGCTGTTGATCTAAGCTTTAATAAGTTTGAGGGACCAATTCACCTTCCAACAGTGCCAGTTTCATTTTTAGATTTTTCACACAATCGTTTTTATGGTGCTATCCCAAGGAACATCATGTTTGGCATAGAATTTTTATCTTTTTCACATAATCAGCTTCAAGGAGAAATACCAATGTCTTTAGGAAAAGTGCAGTCACTTGTGGTCCTGGATCTTTCAAACAACAATTTAACAGGAAAGGTCCCTCCAAGCCTTGGAGATTGTTCATCTCTGGAGGTATTAGACCTTGGGAGCAATAATTTTTTTGGGATAATTCCTGTTTCATTGGGTCAGCTGCAAAGACTCAGATCAttgcatctaagcagtattccaccttggCTAACGGATGGTTTTGCACACCTTAGAATTCTTAGGTTAAGGTCTAATGCATTTTCTGGAGGATTGCCACTTGAGCTTTCAAAACTCAATGCATTACAAGTCCTAGATCTTGCCAGAAATAACTTGGATGGCAACATTCCACCTAGCCTAGGTCATCTGAAAGCTATAGTTGATGAGCGAAAGAAAAACAAATATTTAAGGTACGGAGGATTTGAGGATGTGTACAAAGTGTACTATGAAGAAAGCTTGGTTGTGACTACAAAGGGCCAATCTCTAGTGTATACCAAGACTCTTTCTCTTGTTACTAGCATAGACCTTTCAGATAATAATTTCACTGGAAATCTTCCCAAGGAAATTACAAAGCTATCTGGTTTGGTAGTTCTCAACTTGTCAAGAAATCATATAACTGGCCAAATTCCTGAAGGCATGTCAAATTTGCATCAACTTTCATCTCTTGATCTCTCTCATAATCAACTCTCTGGAATGATTCCCTCTAGCTTGGCTTCTTTATCATTTTTGGGGTACCTAGATTTGTCCAACAACAACTTCTCAGGTGTCATTCCTTATACAGGTCACATGACAACCTTTGATGAATCTTGTTATGTTGGGAATCCTGGTCTGTGTGGTCCTCCCCTTCTTGTAAAGTGTCCAAACGATGTTTATCCTAGTCATGACTACAACAAGGGAGAAAATAATGAGGATGCAAATGATGATAGGTTCAATTTTGAAACCTTTCCAATTTTGCAAGAGGAGCTGGTGTGGGTAGGCCTTGTGGCAGTAATTGGGCCAGGCCTAACAACGCTATTTCCTCTACTGAGAGCCCAAATCCCCTCCACTTCAAGCCCTGCATCTACAGCAAGTTATAGTGCCCCAAATCCAGCTACCAAGGGGTTCTTGGAGGAACTACAAGAAAAAACTCCAGTGTTGACCCTCAATACTCTCTCCCTCCACTCCAAGAGCAGAGGCGAACTTCCTCTCTGCTTCCATCGAACAAGGGGTGGGTGGCTACAGGCCAATTTCTTTGTGATGGAGTTGGGTCGGTTTGAAGGTGATTACAGGAACTTTTCCAGACTCCATCGGGACTACCACCGCAATGGACTCATTACCATTCCCAACATTAGGCCTTACTGGTATCCTCATTACCAGAAGACAGAGATGGACAAGATAATTCATAAAATGCTTTAG 4593 0.4056 MVSFQDANYRGSWCCQLILFFIWLPTFQDVTARETHAGARQISSLVELAKEPISGESGLFEPIEISPAVLPKYPYPTEPLSPMYTSFPSSPNRYLPVLTGKCPVNFSVSDISNIIDKTASDCTGALAALVGNVICCPQFSSLIHIFQGFFNIKSDKLVLPTAASDHCFTDIINILSSKGSNGTMLPTLCSIKPSNLTGGSCPVKDVSTFEKTVNTSKLLEACSTVDPLKECCRPVCQPAIMDAALQISGRQMMLNDNGNVAGEMNHTDYLNDCKGVVYSYLSKKLSLEAANTTFRILSACKVNKACPLNFKEPSEVMNACRNVAAPSPSCCSSLNTYIAGIQQQMLITNKQAIICATLFGSMLRRGGIMTNVYQLCDVDLKDFSLQSLCAGCLLGSLPQDVIFDNSSGFSFTCDLSDNVAAPWPSSSSITSVSLCAPEMSLPALPTSALKNIGCNSGGVGFLVPIFSFFIFNDALNSTTGQIVKMSLEGFHGIKPDLRATTMEKITLVAFLLLVFCFTNTYYAPNSYAQPVDCLASDREALIDFKDGLDDPANQLSSWMDRKCCQWHGIRCDNRTGAVVAIDLPGSYNRYGLLNLSGAVRPSLMKLKSLRHLDLSLNSFNGIPIPAFLGSLENLQYLNLSYAGFRGKIPRNFRNLSHLKSLDISSEVLSLHAETLKWVTGLVSLEHLALRGVDLSMVGTDWVSAINTLPSLVELHLSDCSLQGHIPILPSLNFTSLAVMDLRSNDIVSKIPDWLVNITSLHHIDISHNHMYGSIPLGFGEMPNLLSLKLLDNENLTANCSQLFRGRWEKTQVLNLVANQIYGKLPSSFGNLTSLVHLDLSDNPIEGELPVSIGPIPVSRGSLQKLTSLDLGVNRLNGTLPESIGQLSQLQILSVIDNQLTGVISEAHFSKLSQLDTLLLSSNSFFVTVSSHWIPPFQLTDLEMGSCVLGPSFPAWLKSQNKVDYLDFSNAGISGFVPNWFWDMSSNMSYLNISHNELQGKLPTPIPIAQFTAVDLSFNKFEGPIHLPTVPVSFLDFSHNRFYGAIPRNIMFGIEFLSFSHNQLQGEIPMSLGKVQSLVVLDLSNNNLTGKVPPSLGDCSSLEVLDLGSNNFFGIIPVSLGQLQRLRSLHLSSIPPWLTDGFAHLRILRLRSNAFSGGLPLELSKLNALQVLDLARNNLDGNIPPSLGHLKAIVDERKKNKYLRYGGFEDVYKVYYEESLVVTTKGQSLVYTKTLSLVTSIDLSDNNFTGNLPKEITKLSGLVVLNLSRNHITGQIPEGMSNLHQLSSLDLSHNQLSGMIPSSLASLSFLGYLDLSNNNFSGVIPYTGHMTTFDESCYVGNPGLCGPPLLVKCPNDVYPSHDYNKGENNEDANDDRFNFETFPILQEELVWVGLVAVIGPGLTTLFPLLRAQIPSTSSPASTASYSAPNPATKGFLEELQEKTPVLTLNTLSLHSKSRGELPLCFHRTRGGWLQANFFVMELGRFEGDYRNFSRLHRDYHRNGLITIPNIRPYWYPHYQKTEMDKIIHKML 1530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01294 1530 Gene3D Ribonuclease Inhibitor 533 708 IPR032675 -
Aip03g01294 1530 SMART LRR_typ_2 1258 1281 IPR003591 -
Aip03g01294 1530 SMART LRR_typ_2 831 855 IPR003591 -
Aip03g01294 1530 SMART LRR_typ_2 606 629 IPR003591 -
Aip03g01294 1530 SMART LRR_typ_2 862 886 IPR003591 -
Aip03g01294 1530 SMART LRR_typ_2 1282 1305 IPR003591 -
Aip03g01294 1530 SMART LRR_typ_2 1306 1329 IPR003591 -
Aip03g01294 1530 SMART LRR_typ_2 631 654 IPR003591 -
Aip03g01294 1530 SMART LRR_typ_2 1165 1189 IPR003591 -
Aip03g01294 1530 SMART LRR_typ_2 1074 1098 IPR003591 -
Aip03g01294 1530 Gene3D Ribonuclease Inhibitor 904 1038 IPR032675 -
Aip03g01294 1530 Gene3D Ribonuclease Inhibitor 709 903 IPR032675 -
Aip03g01294 1530 Pfam Leucine rich repeat N-terminal domain 535 572 IPR013210 -
Aip03g01294 1530 SUPERFAMILY RNI-like 733 1021 - -
Aip03g01294 1530 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 1132 1372 - -
Aip03g01294 1530 Pfam SPARK 99 255 IPR043891 -
Aip03g01294 1530 Pfam Leucine rich repeat 1076 1132 IPR001611 GO:0005515
Aip03g01294 1530 Pfam Leucine rich repeat 608 666 IPR001611 GO:0005515
Aip03g01294 1530 Pfam Leucine rich repeat 864 923 IPR001611 GO:0005515
Aip03g01294 1530 Pfam Leucine rich repeat 1237 1295 IPR001611 GO:0005515
Aip03g01294 1530 PANTHER - 502 853 - -
Aip03g01294 1530 PANTHER - 853 1131 - -
Aip03g01294 1530 SUPERFAMILY L domain-like 1010 1349 - -
Aip03g01294 1530 Gene3D Ribonuclease Inhibitor 1039 1358 IPR032675 -
Aip03g01294 1530 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 853 1131 - -
Aip03g01294 1530 PRINTS Leucine-rich repeat signature 1282 1295 - -
Aip03g01294 1530 PRINTS Leucine-rich repeat signature 1077 1090 - -
Aip03g01294 1530 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 502 853 - -
Aip03g01294 1530 PANTHER - 1132 1372 - -
Aip03g01294 1530 SUPERFAMILY L domain-like 533 797 - -
Aip03g01294 1530 Pfam Leucine Rich repeat 831 847 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01294 Aip-Chr3 13116999 13128251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01294 505 1352 Receptor kinase-like Gene Family AT4G13920 31.674 8.64e-90 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01294 - - ahf:112732706 1405.19