Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01272 ATGAGAACGATATCGGGGGCATTTCGCTCCATCAAACGCCCAAATGTAAACCCTAATTTATCCAAATCCTCACCCCCTACTGCTTCCACATCACACCTGAATTTCAATTCCGAACCAAAATCGGAGTCTTGGTGCGTTTATCTGATCCTCTCCACCAACCACCCAATCAAAACCTACGTTGGGGTCACAACCAATTTCCCTCGCCGATTGAAGCAGCATAACGGCAAGCTTAAGGGTGGTGCAAAAGCATCCCGTGCTGGAAGGCCATGGATTTGTGCATGCCTCATTTGTGGTTTTGCAGACCGGAGTGAAGCTTGTGTGTTTGAATCAAAATGGAAAGATTTCTCAAGGAAATCTCCCCGCAAAAGTCAAGGTGGCAGCAGCTCCAAACAGATTGAAGATCCCTCACGTCCGTTGCTGCAACACAGGCAAGCAGCTTTAAATAGAGTGAAAGGCTCACTCGACTGCTCTCACTTAGAAATTAACTGGCATTTAGATCCATCGTGA 507 0.4694 MRTISGAFRSIKRPNVNPNLSKSSPPTASTSHLNFNSEPKSESWCVYLILSTNHPIKTYVGVTTNFPRRLKQHNGKLKGGAKASRAGRPWICACLICGFADRSEACVFESKWKDFSRKSPRKSQGGSSSKQIEDPSRPLLQHRQAALNRVKGSLDCSHLEINWHLDPS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01272 168 MobiDBLite consensus disorder prediction 121 135 - -
Aip03g01272 168 ProSiteProfiles GIY-YIG domain profile. 42 124 IPR000305 -
Aip03g01272 168 MobiDBLite consensus disorder prediction 1 35 - -
Aip03g01272 168 SUPERFAMILY GIY-YIG endonuclease 43 118 IPR035901 -
Aip03g01272 168 MobiDBLite consensus disorder prediction 117 140 - -
Aip03g01272 168 Pfam GIY-YIG catalytic domain 44 118 IPR000305 -
Aip03g01272 168 PANTHER EMB|CAB76036.1 19 167 - -
Aip03g01272 168 Gene3D - 38 142 IPR035901 -
Aip03g01272 168 PANTHER STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 19 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01272 Aip-Chr3 12720688 12722694 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01272 K15078 - gmx:100805152 266.544