Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01233 ATGATGCTGGATTTGGGTCCGTTCTCAAGCGAGAACTTCGACTCTAAGAAATGGATCAACGCCGCTTGCCAGAGCCGTCACCAGCAGGAGCCAGTCGACAAGCACTTTGTCGACATGGAGATGAAAATCCAGATGGTCTCCGAGGAGATCGCCGCCTCCCTCGAGGAACAGAGCGCCGGCGCTCTCCTCCGAGTCCCCCGCGCCACCCGTGACGTCATCCGACTCCGTGACGATGCCGTTTCTCTCCGCTCCGCCGTCTCCGCCATCCTCCAGAAGCTCAAGAAGGCAGAGGGATTGTCCGCTGAATCTATAGCAGCCCTTGCTAAAGTTGACAATGTCAAGCAGAGGATGGAAGCTGCTTATGAGACATTGCAGGATGCTGCTGGATTAACTCAATTAAGTTCGACTGTGGAGGATGTATTTGCTAGTGGTGATCTCCCTCATGCTGCAGAAACTCTGGCTAATATGAGACATTGCTTGTCTGCTGTTGGGGAGGTTGCTGAATTTGCCAACATAAGAAAGCAACTTGAAGTCTTGGAAGATAGGCTAGACATGATGGTGCAGCCCCGCCTTACTGATGCATTATCGAATCGCAAGGTTGATGCTGCCCAAGATTTGCGGGAAATTCTAATCAGAATTGGGAGATTTAAGTCTTTAGAATCGCAATACACAAAGGTTCACTTAAAACCAATAAAGAAGCTCTGGGAAGATTTTGACTCAAAAGACCGAGCCAATAAGTCTGCAAATGAGAAGAACGAAATGGAGAGGATATCAAGTAGTGGTGATTTTCAGTCAGCTTTGCCAACAATATCGTTCTCCAGTTGGTTGCCAAACTTTTATGATGAACTATTACTTTATCTTGAACAAGAATGGAAATGGTGTATGATTGCTTTTCCAGAAGATTATAAAACTCTAGTCCCAAGGCTACTAAGTGAGACTATGATGTCTATAGGTTCCAGTTTCGTATCTCATATCAATGTTGCCATTGGAGATGCTGTTCCTGAAACGAAAGCACTTGCTAAAGGCTTATTGGATATATTATCTGGAGATATGCAAAAGGGCATTAAGATTCAGACTAAGCATCTAGAGGCATTGATTGAATTACACAACATGACGGGTACATTTGCAAGGAATATTCAACACTTATTTTCGGATTCTGATGTCCGAGTTTTAATAGATGTCCTGAAAGCTGTGTACTTGCCATATGAATCATTTAAACAGAGGTATGGACAAATGGAGCGTGCCATCCTTTCCTCAGAGATTGGAGGAGTAGATTTAAGAGGAGCTGTTATTCGAGGTGTGGGAGCCCAAGGAGTAGAACTCAGCGAAACAGTTCGCAGGATGGAGGAGTCTATTCCGCAAGTTATTATACTTCTTGAAGCAGCTGTGGAGAGATGCATCAACTTCACTGGAGGTTCTGAGGCAGATGAGCTAATTCTTGCTCTTGATGACATAATGTTACAGTACATTGCTACTCTGCAAGACACTCTCAAGTCACTAAGAACTGTATGTGGTGTCGATTATGGTAGTGATGGTACAATAAAGAAGGAAACGGAGAAGAAGGATGGAAACCCAAATGCTCGAAGAGTTGATTTGATCTCAAATGAAGAGGAGTGGTCCATAGTTCAAGGGGCATTGCAAATCCTGACAGTTGCAGATAGTTTGACAAGCAGGTCTTCTGTATTTGAAGCATCTTTGAGAGCTACACTTGCTAGATTGAGCACGAGTCTATCCTTTTCAGTATTTGGTTCAAGTTTAGACCAAAACCAGACAATAAGAAGTAGTAATGAAGATGGGGAGCCATATTTTGGTGGAAGGGCTGCCTTGGATATGGCAGCTCTGCGGCTTGTTGATGTGCCGGAAAAGGCTAGGAAACTCCTTAACCTTTTGAATCAGTCTAAAGATCCCCGATTTCATGCACTTCCTCATGCATCTCAAAGAGTTGCAGCATTTGCTGATACAGTGAATGAACTTGTATACGACGTCCTCATATCTAAAGTACGGCAACGCCTCAGTGATGTGTCCCGATTGCCAATTTGGTCATCAGTAGAGGAGCAAAGTGCTTTTCATCTTCCTACCTTCAGTGCATATCCACAGTCCTATGTGACCAGTGTTGGTGAATACCTTCTTACTCTACCCCAACAATTGGAGCCACTTGCTGAGGGAATCTCTAGCAGTGAAAACAATGATGAAGCTCAGTTCTTTGCAACTGAATGGATGTTCAAGGTCGCAGAAGGGGCAACAGCACTGTACATAGAGCAATTGCGTGGGATTCAGCACATTTCGGATCGTGGAGCGCAACAGCTGTCAGTTGATATTGAGTATCTTAGTAATGTGCTATCCGCTTTGTCGATGCCAATCCCCGCTGTTTTGGCCACATTCCAAAGTTGTCTCTCTGCGTCAAGGGACCAGTTAAAAGATCTTCTCAAGTCAGATTCAGTAGATATGCCAACAGCAAACCTTGTGTGCAAGATGCGGCGAGTGAATTTAGATTCATGA 2499 0.4458 MMLDLGPFSSENFDSKKWINAACQSRHQQEPVDKHFVDMEMKIQMVSEEIAASLEEQSAGALLRVPRATRDVIRLRDDAVSLRSAVSAILQKLKKAEGLSAESIAALAKVDNVKQRMEAAYETLQDAAGLTQLSSTVEDVFASGDLPHAAETLANMRHCLSAVGEVAEFANIRKQLEVLEDRLDMMVQPRLTDALSNRKVDAAQDLREILIRIGRFKSLESQYTKVHLKPIKKLWEDFDSKDRANKSANEKNEMERISSSGDFQSALPTISFSSWLPNFYDELLLYLEQEWKWCMIAFPEDYKTLVPRLLSETMMSIGSSFVSHINVAIGDAVPETKALAKGLLDILSGDMQKGIKIQTKHLEALIELHNMTGTFARNIQHLFSDSDVRVLIDVLKAVYLPYESFKQRYGQMERAILSSEIGGVDLRGAVIRGVGAQGVELSETVRRMEESIPQVIILLEAAVERCINFTGGSEADELILALDDIMLQYIATLQDTLKSLRTVCGVDYGSDGTIKKETEKKDGNPNARRVDLISNEEEWSIVQGALQILTVADSLTSRSSVFEASLRATLARLSTSLSFSVFGSSLDQNQTIRSSNEDGEPYFGGRAALDMAALRLVDVPEKARKLLNLLNQSKDPRFHALPHASQRVAAFADTVNELVYDVLISKVRQRLSDVSRLPIWSSVEEQSAFHLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISSSENNDEAQFFATEWMFKVAEGATALYIEQLRGIQHISDRGAQQLSVDIEYLSNVLSALSMPIPAVLATFQSCLSASRDQLKDLLKSDSVDMPTANLVCKMRRVNLDS 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01233 832 Pfam Golgi complex component 7 (COG7) 4 827 IPR019335 GO:0006886|GO:0017119
Aip03g01233 832 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 1 826 IPR019335 GO:0006886|GO:0017119
Aip03g01233 832 Coils Coil 107 127 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01233 K20294 - gmx:100794449 1438.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01233 03 12236189 12241664 Aip03g01233 03 12236189 12241664 ECH