Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01208 ATGGTAGCAGAAACCGTTCACCGCCACAACCACGACGCCAACGATGGTAACAGAACCCTGATCTTCTCGTACGGAACCTTGAAGAGAGGCTTCTCCAACCACAACCTCCTCCAAGACCTAATCCGCACCGGCGACGCCTCCTTCATCGGCCTCTACAAGACATCGCACCGCTACCCCCTCGTCTGCGGGCCCTACAGAGTCCCCTTCCTCCTCAACCTCCCGGGCTCGGGCCACAGAGTCCATGGCGAGTTGTACTCCGTCTCGGCCCGCGGCCTGGCCCGTATGGACGAACTCGAAGGAACCACGCGCAACCACTACGAGCGGTTACCGATCAAGCTTCTTCCGGCCGAGGAAGGCGCTGACGAGAATGTAAACAACGAGGATCAGGTAAATTTGGAAGATGAGACGATGATGACGGATGATGCGCCGGGCGTGCTAACGTGCGCAGAGGCGTATTTTGCGCATAGTAACTACGCCGTTGAGATGTGGAAGAAGAATGGGAAGAGAGGGTTACGGTGTTATACCAAGAAAGAGACCAAGGGTTACGTCAAGCGCGGTGATCGGCCTCAGCATTTGACCTTCCTTGATCACATTCGCTTGTTCCTTTCTGAATGA 615 0.5577 MVAETVHRHNHDANDGNRTLIFSYGTLKRGFSNHNLLQDLIRTGDASFIGLYKTSHRYPLVCGPYRVPFLLNLPGSGHRVHGELYSVSARGLARMDELEGTTRNHYERLPIKLLPAEEGADENVNNEDQVNLEDETMMTDDAPGVLTCAEAYFAHSNYAVEMWKKNGKRGLRCYTKKETKGYVKRGDRPQHLTFLDHIRLFLSE 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01208 204 CDD GGCT_like 21 119 IPR013024 -
Aip03g01208 204 Gene3D - 8 188 - -
Aip03g01208 204 PANTHER BNACNNG06060D PROTEIN 10 203 - -
Aip03g01208 204 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 19 117 IPR036568 -
Aip03g01208 204 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 21 154 IPR009288 -
Aip03g01208 204 PANTHER TROPONIN C-AKIN-1 PROTEIN 10 203 IPR039126 GO:0061929
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01208 Aip-Chr3 11983682 11984567 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01208 K19761 - gmx:100802936 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01208 03 11983682 11984567 Aip03g01208 03 11983682 11984567 ECH