Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01206 atgattacagggtgtcgccgcctccttggtctttctctgctatcttctcgctcgAAAAAAATTCCAAGAAACTATCGGGTACCCGACCCGGACAAGATAAGACCCCCCATAAACCCTAAAACCCTACAAACTGAAACTGCACACCTTCCCCTGACTACTCATTACGAGACGATCAATATGAATAACATGAGGGTTCCAAATGTTCCTGGTGGAGGGCTTTCTGCTCTGCTCAAAGTTAGCATCTTTGGTGGTCTTGCTGTGTATGGAGCTGCAAACAGCTTGTACAATGTTGAGGGAGGGCACCGAGCTATCGTCTTCAATCGCATTGTTGGTGTCAAAGATAAGGTCTATCCTGAAGGAACACATTTTATGATTCCTTGGTTCGAGAGGCCTGTGATCTATGATGTCCGTGCACGACCTCATTTAGTGGAGAGTACATCAGGAAGTCGTGATCTCCAAATGGTGAGAATTGGACTTAGGGTCCTTACCCGTCCTCTACCAAGTCATTTACCAACAATTTACCGAACCCTGGGTGAGAATTATAACGAGAGGGTCTTGCCTTCTATTATACATGAAACTCTGAAAGCTGTGGTTGCACAGTACAATGCCAGTCAGCTCATTACTCAGAGAGAGAATGTCAGTAGAGAAATAAGGAAGATCTTGACTGAAAGGGCCTCCCATTTCAATATTGCATTGGATGATGTGTCAATCACAAGCTTGACATTCGGTAAGGAATTTACAGCTGCAATTGAAGCTAAGCAGGTTGCTGCTCAAGAAGCTGAGAGGGCTAAGTTTGTGGTAGAAAAAGCTGAACAGGACAAAAGAAGTGCTGTTATTAGAGCACAGGGAGAAGCCAAGAGTGCACAATTGATTGGTCAAGCTATTGCCAATAATCCTGCATTTATCACCTTGAGGAAAATTGAAGCTGCAAGGGAAATCGCTCATACAATTTCAAATGCTGCTAACAAGGTTTACTTGAATTCAGATGACCTCTTGCTGAATCTTCAAGAGATGAATTTGGAGCCAGCGGGGAAGAGATAG 1041 0.414 MITGCRRLLGLSLLSSRSKKIPRNYRVPDPDKIRPPINPKTLQTETAHLPLTTHYETINMNNMRVPNVPGGGLSALLKVSIFGGLAVYGAANSLYNVEGGHRAIVFNRIVGVKDKVYPEGTHFMIPWFERPVIYDVRARPHLVESTSGSRDLQMVRIGLRVLTRPLPSHLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSREIRKILTERASHFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRKIEAAREIAHTISNAANKVYLNSDDLLLNLQEMNLEPAGKR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01206 346 CDD SPFH_prohibitin 94 288 IPR000163 GO:0016020
Aip03g01206 346 SUPERFAMILY Band 7/SPFH domain 125 261 IPR036013 -
Aip03g01206 346 Coils Coil 253 273 - -
Aip03g01206 346 PRINTS Prohibitin signature 272 288 IPR000163 GO:0016020
Aip03g01206 346 PRINTS Prohibitin signature 249 272 IPR000163 GO:0016020
Aip03g01206 346 PRINTS Prohibitin signature 137 153 IPR000163 GO:0016020
Aip03g01206 346 PRINTS Prohibitin signature 178 196 IPR000163 GO:0016020
Aip03g01206 346 PRINTS Prohibitin signature 201 217 IPR000163 GO:0016020
Aip03g01206 346 PRINTS Prohibitin signature 224 243 IPR000163 GO:0016020
Aip03g01206 346 PRINTS Prohibitin signature 155 174 IPR000163 GO:0016020
Aip03g01206 346 PANTHER PROHIBITIN-1, MITOCHONDRIAL-LIKE 59 344 - -
Aip03g01206 346 SMART PHB_4 93 254 IPR001107 -
Aip03g01206 346 PANTHER PROHIBITIN 59 344 IPR000163 GO:0016020
Aip03g01206 346 Pfam SPFH domain / Band 7 family 96 271 IPR001107 -
Aip03g01206 346 Gene3D Band 7 domain 124 256 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01206 Aip-Chr3 11941367 11945574 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01206 K17081 - gmx:100811958 523.472