Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01201 ATGTCTCTGTCTCTGCGTTTATCTTCTTCTTTTCTTCCCCAAATTCCAACTTCTCCTTCTTTCTTATGTTTTGTTCCTCCCAAGTTCCAAAATGGCGACTTCCTTATTTGCCGCTACAGGCGCAGACAACCCTCCCTTTTAACCCTACGTTGCTTTTCCACCTCTAAACCATACGATAATGGGAGGGAACACCATCGTGAAGAAGAAGAACATGATAATCAACGAATGAAGGGTCCTCAAATGGATGATGAAGAAGAGGAGGAAGACAAAGCTATTGCTTCGTTGGTTTTGCCTGAAAGATGGGATGTTTTGGGACTTGGTCAAGCCATGGTAGACTTCTCGGGCATAGTAGATGACGAGTTCCTTAACAAGTTGGGATTGGAGAAGGGAACGCGCAAGGTTGTGAATCACGAGGAAAGGGGTAGAGTCTTGCAGGCTATGGATGGTTGCACCTATAAAGCAGCTGCTGGTGGATCTCTTTCTAATAGCTTGGTTGCCCTTGCCAGGCTTGGAAGTCGTTCCGCCACAACTCCTGCCATAAACGTGGCAATGGCTGGCAGTGTAGGAAGTGATGTCTTGGGTGGCTTCTACAGGGAAAAATTACGGCGAGCAAATGTGCAATTTCTTTCTGAGCCTATCAAGGATGGAACTACCGGAACGGTTATAGTTCTCACAACACCAGATGCTCAACGCACAATGCTTGCATATCAGGGTACATCATCAACTGTTAACTATGACAAAATCTTGGCTAATGCGGTTACCAAGACCAACATACTTGTTGTTGAAGGGTATCTATTTGAACTACCCGATATAATTAGAGCAATAACAGAAGCATGTCAGAAAGCTCGCAGTAATGGTGCCTTAGTTGCAGTAACAGCCTCAGATGTCTCCTGCATTGAGAGACACTATGATGATTTCTGGGAAATTATTGGGAATCATGCGGATTTAATCTTCGCAAACAGTGATGAGGCCAGAGCGCTCTGCAATTTCGACGCAAAGGAAAGCTCTGCTTCGGTTACAAGGTATCTGAGCCACTTTGTTCCGCTAGTATCGGTAACTGACGGTCATAGAGGCTCCTACATCGGTCTAAAGGGTGAAGCCGTATACATTCCCCCGTTTCCATGTGTTCCGGTAGATACTTGTGGTGCCGGAGATGCATATGCATGCGGCATACTTTATGGTGTTCTAAGAGGCATATCTGATTTGAAAAGCATAGGTTCAATAGCAGCTAAGGTTGCAGCGACTGTTGTAGGTCAACAAGGAACAAGGCTTAGAGTCTCAGATGCAGTGAAATTGGCTGAATCTTTCACATTTCATAGATCTACTATTGGATCAGATATTGGCACTGATCACATTTCTAGTGTCTAA 1368 0.4481 MSLSLRLSSSFLPQIPTSPSFLCFVPPKFQNGDFLICRYRRRQPSLLTLRCFSTSKPYDNGREHHREEEEHDNQRMKGPQMDDEEEEEDKAIASLVLPERWDVLGLGQAMVDFSGIVDDEFLNKLGLEKGTRKVVNHEERGRVLQAMDGCTYKAAAGGSLSNSLVALARLGSRSATTPAINVAMAGSVGSDVLGGFYREKLRRANVQFLSEPIKDGTTGTVIVLTTPDAQRTMLAYQGTSSTVNYDKILANAVTKTNILVVEGYLFELPDIIRAITEACQKARSNGALVAVTASDVSCIERHYDDFWEIIGNHADLIFANSDEARALCNFDAKESSASVTRYLSHFVPLVSVTDGHRGSYIGLKGEAVYIPPFPCVPVDTCGAGDAYACGILYGVLRGISDLKSIGSIAAKVAATVVGQQGTRLRVSDAVKLAESFTFHRSTIGSDIGTDHISSV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01201 455 Gene3D - 104 421 IPR029056 -
Aip03g01201 455 SUPERFAMILY Ribokinase-like 101 424 IPR029056 -
Aip03g01201 455 CDD adenosine_kinase 100 425 - -
Aip03g01201 455 MobiDBLite consensus disorder prediction 58 87 - -
Aip03g01201 455 PRINTS Ribokinase signature 152 171 IPR002139 GO:0016301
Aip03g01201 455 PRINTS Ribokinase signature 309 324 IPR002139 GO:0016301
Aip03g01201 455 PRINTS Ribokinase signature 350 361 IPR002139 GO:0016301
Aip03g01201 455 MobiDBLite consensus disorder prediction 58 81 - -
Aip03g01201 455 Gene3D - 110 236 - -
Aip03g01201 455 Pfam pfkB family carbohydrate kinase 151 424 IPR011611 -
Aip03g01201 455 PANTHER KINASE, PUTATIVE, EXPRESSED-RELATED 71 443 - -
Aip03g01201 455 PANTHER HEXOKINASE FAMILY MEMBER 71 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01201 Aip-Chr3 11882318 11885209 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01201 - - lang:109355577 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01201 03 11882318 11885209 Aip03g01201 03 11882318 11885209 ECH