Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01150 ATGCTCGTTTTCTCATGCTTCGGTCGGAAGACGAACGCAATAATGTGTACTTCTCAGCCTCAAACTTTTTCTCTTCCCTCTCCGATCCCGAATTGGCCTCACGGAGGAAGTTTTGCTTCTGGATTTGCAAATCTTGGTGAAATAGAAGCTTTCAAGGTCTCTAATTTTGAGTTCATTTGGAGCAGCAATGCTATGCAGGACAAAAAGAATGCTGTTGTGTTCTATAAGCCTGTCGAAATACCTCAGGGTTTCCACATCCTTGGCCATTATTGTCAACCTAGCAACAAGCCTTTAAGGGGTTTTGTGCTTGTTGCTAAGGAAGTTGAAACTAATCATTGCGATGATCACGACAAGCTACCTCCCCTGAGGAATCCCCTGAATTTTGAGTTAGTTTGGAGTTCGAATGCAGGAAATCGTGAAACTCTGAGTGGTTGTGGTTACTTTTGGATACCTGAGCCTCCAGAAGGTTACAAGGCAGTTGGATACTTGGTTACTGACAATCCTAATAAGCCTCAGTTGGATGAAATCTGCTGTGTTCGTTCTGACCTCACTGATAAATGCGAGCCTTACCGCCTATTACTCGCTGTAAATTCTAAAATTCCAGAGCTTTCATTTCAGGCTTGGAACTTGAGACCTTGTGATCGCAGCGTTCAAGGGCAAGGAGTTCCAGTTGGGTCCTTTTTCTGTAGTAACGGATGCTGGAACATCGGTGAAGAGCTTCCAATTGCATGCTTGAGGAACCTAAATCCTGTTCAACAAACAATGCCAAACCTGGAACAGATACATGCACTTATCCAGCATTATGGTCCTACCATTTTCTTTCATCCGGAAGAAGTTTACTTGCCGTCTTCTGTGGTCTGGTATTTCAACAATGGAGCTTGCTTGTACAGAAAGGGTGTAACTACAGGCGAGGCAATTGATGAAACCGGCTCAAATCTACCTCGTGGAGGAACGAATGACAAGGAGTTTTGGATAGACTTGCCAAGTGATGATAGAAAGGACTTTCTCAAACGCGGGGACTTGCAAAGTGCAAGGCTTTATGTTCATGTGAAGCCGGCACTTGGTGGAACTTTCACAGACATTGCAATGTGGATTTTCTGTCCATTCAATGGACCAGCCACTCTTAAAATTGGAATGAAAAACATACCTTTAAGCAAGATTGGAGAGCATGTTGGTGATTGGGAGCATTTCACACTTAGAGTATGCAATTTCAATGGAGAATTATATAGTATATACTACTCACAGCATAGTGGGGGAGAATGGGTTGATGCATATGATTTAGAATACATTGATGGAAACAAAGCTATTGTTTACTCTTCAAAAAATGGGCATGCTAGTTACCCTCATCCTGGAACCTTTATCCAAGGTTCTTCAAAACTTGGAGTTGGGATCAGAAACGATGCGTGTCGAAGCAACTTTTATGTGAATTCAAGTGTTCACTATGAGATTGTTGCAGCTGAATATCTTGGAGATGCTGTCAAGGAGCCTCTGTGGTTGCAGTATATGAGAGAGTGGGGGCCAAAAATCGTTTATGATTCGAGAACTGAGATTGATAGGATAATCGATGCGCTTCCGCGAATGCTTCGGTTCTCAGTGAAGAACTTCTTTAACAAGCTTCCAGTGGAGCTGTATGGTGAGGAAGGTCCTACAGGGCCAAAAGAGAAAAACAATTGGACAGGAGATGAAAGATGGTGA 1695 0.4301 MLVFSCFGRKTNAIMCTSQPQTFSLPSPIPNWPHGGSFASGFANLGEIEAFKVSNFEFIWSSNAMQDKKNAVVFYKPVEIPQGFHILGHYCQPSNKPLRGFVLVAKEVETNHCDDHDKLPPLRNPLNFELVWSSNAGNRETLSGCGYFWIPEPPEGYKAVGYLVTDNPNKPQLDEICCVRSDLTDKCEPYRLLLAVNSKIPELSFQAWNLRPCDRSVQGQGVPVGSFFCSNGCWNIGEELPIACLRNLNPVQQTMPNLEQIHALIQHYGPTIFFHPEEVYLPSSVVWYFNNGACLYRKGVTTGEAIDETGSNLPRGGTNDKEFWIDLPSDDRKDFLKRGDLQSARLYVHVKPALGGTFTDIAMWIFCPFNGPATLKIGMKNIPLSKIGEHVGDWEHFTLRVCNFNGELYSIYYSQHSGGEWVDAYDLEYIDGNKAIVYSSKNGHASYPHPGTFIQGSSKLGVGIRNDACRSNFYVNSSVHYEIVAAEYLGDAVKEPLWLQYMREWGPKIVYDSRTEIDRIIDALPRMLRFSVKNFFNKLPVELYGEEGPTGPKEKNNWTGDERW 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01150 564 PANTHER PROCESSING PROTEIN PRP39, PUTATIVE-RELATED 6 564 - -
Aip03g01150 564 Pfam Vacuolar protein sorting-associated protein 62 20 562 IPR009291 -
Aip03g01150 564 PANTHER - 6 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01150 Aip-Chr3 11374304 11376553 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01150 - - gmx:100811439 851.277