Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01138 ATGAGTGTCACCACTGGAAATGTTGTGTGTGTCACTGGTGCCTCCGGCTACATCGCTTCATGGATAGTCAACTTTCTCCTTCAACGTGGCTACACAGTCAGGGCAACAGTTCGTGATCCAAGTGATCCAAAGAAGGTTGAGCACTTGCTCAAACTCAATGGTGCAAAGGAGAGGTTGCACCTCTTCAAGGCAGATCTTCTAGAAGAAGGTTCTTTTGACTCCGCCATTGAAGGATGTGATGGTGTCTTTCACACAGCTTCGCCTGTTTTACTTCATGTTGTTAAAGATCCAGAGGCTGAATTGATTGATCCAGCAGTGAAGGGAACTGTGAATGTACTTGGAGCATGCGCAAAATCACCATCTGTGAAACGAGTTGTCTTAACATCTTCCATTTGCGCAGTTGCATTCTCTTCCCGGCCTAAAACTCCTCAAGTAGTAGTTGATGAGACTTGGTTCTCAGATCCTCAATTCTCCTACCAATTGAAGACATGGCAGTGGTATACAATTTCAAAGACTTTGGCTGAGGAAGCTGCGTGGAAGTTTGCGGAGAAGAACGGCATTGACATGGTTGTTATCAACCCAGTGCTGGTGGCAGGACCTCTCTTGCAACCAGAAGTTAATGCAAGTGTTGAGCCAATCCTCAATCTAATCAATGGGAAAAAATTTCCAAATAGTTCTTTTGGATGGGTCAATGTAAAAGATGTTGCAGAGGCACACATTAAGGCATATGAGATTGCTTCAGCTAGTGGAAGATATTGTTTGTCTGAAAGAGTGGTTCACTACTCTGAACTTGCTAGGATTTTAAAATCTCTCTACCCAACGTTACAAATTACTACTGAGTGCGAGGATGATGGGCCCTATGTGCCAACATATCAGATTTCTAAAGAGAAGGCAAAGAGTTTGGGAATTGAATTCCAACCCTTGGAAGTAAGCCTCAAAGAAACTGTTGAAAGCTTTAGAGAGAAGAACATTGTCAATTTCTAA 984 0.4309 MSVTTGNVVCVTGASGYIASWIVNFLLQRGYTVRATVRDPSDPKKVEHLLKLNGAKERLHLFKADLLEEGSFDSAIEGCDGVFHTASPVLLHVVKDPEAELIDPAVKGTVNVLGACAKSPSVKRVVLTSSICAVAFSSRPKTPQVVVDETWFSDPQFSYQLKTWQWYTISKTLAEEAAWKFAEKNGIDMVVINPVLVAGPLLQPEVNASVEPILNLINGKKFPNSSFGWVNVKDVAEAHIKAYEIASASGRYCLSERVVHYSELARILKSLYPTLQITTECEDDGPYVPTYQISKEKAKSLGIEFQPLEVSLKETVESFREKNIVNF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01138 327 CDD FR_SDR_e 9 302 - -
Aip03g01138 327 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 325 - -
Aip03g01138 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 321 IPR036291 -
Aip03g01138 327 Pfam NAD dependent epimerase/dehydratase family 9 244 IPR001509 -
Aip03g01138 327 Gene3D - 7 327 - -
Aip03g01138 327 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 4 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01138 Aip-Chr3 11239925 11245048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01138 6 327 Miscellaneous Gene Families AT5G19440 67.492 1.67e-164 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01138 - - gmx:100799213 502.286