Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01136 ATGCCATATATGGCTTCTTTTCTTGTTTCTCCAATCCACAACCACCCTACCACTACCTTCCCATGCCTAATTTTCCATCCAACAACACCTATCTTCCACAACCCACTCTCTCTTCAAAACAACAAACTCTCTTCCCCACAATCCTTCATCAAATGTTCTATCTCAAGCCTACGCCCCCGAGACCAGGAGTATCTGCACCAAAAATCAAGAGACGAGGACGGAGAGGAGGAGGAAGAAGAAGAACTTGAAGAAGAAATTCTTCTCTCCCATGAACCTCCCTTGAACCAAGTGTGGAAACAAATCCAAGGCTCCAACGACTGGGAAGGCCTACTAGACCCCATGAACCCACACCTAAGAAGGGAAATTATCCGCTGCGGCGAGCTAGCACAAGCATGCTACGACTCCTTTGACTTTGACCCTCACTCCAAATACTGCGGCACCTGCAAGTACCATCCCTCACACTTCTTCGAGAAGCTTCTCATGGAAGAAAAAGGGTACACCATAAGCCGCTACCTCTACGCCACATCCAACATCAACCTTCCAAACTTCTTCCAAAAATCTTCCATTGCCAGCGTGTGGAGCCCACACGCCAACTGGATGGGATACGTGGCAGTCTCCACCGACGAGGACGAGATCCAGCGTCTCGGACGCCGAGACATCGTCATCGCCTGGAGAGGCACCGTCACGTACATCGAGTGGATCTACGACCTCAAGGACATTCTCACGCCCGCAAACTTCACCAACGACCCAACCATCAAGATCGAGTCCGGTTTCTATGACTTGTACACCAAGAAAGAAGACGCGTGCAGCTACTGCTACTTCTCGGCGCGTGAACAAATCTTATCTGAGGTGAAACGTCTTGTACAGTATTACGAAGACGAAGAACTCAGCATAACCATAACAGGGCATAGTCTGGGTGCTGCTTTGGCCGTACTAAGCGCTTATGACATAGCGGAACTCAAACTGAACGTTATCGAAAACGGTGATGTAACGGCCAAGATTCCCGTAACGGTTTTCTCGTTTGCGGGGCCCAGGGTTGGGAATCTGAAATTCAAAGAACGGTGCGAGGAGCTTGGGGTGAAAGTTTTGAGGGTGATAAACGTGCATGACATGGTTCCAACCGTTCCAGGGATAATAACGAACGAGAAGTTTCAGTTTCAGAAGTACATAGAAGACGCGTTGAGTTTTCCGTGGAGCTACGCGCATGTTGGTGTGGAACTTGCATTGGATCATAGAGAGAGTCCGTTTTTGAAGGCGACGGGTGATTTAGGGTGCGCACATAACTTGGAGGCGCACCTGCACCTTGTTGATGGCTACCATGGGAAGAAGAGGAGGTTTAGGTTGGCTTCCAAGAGGGACATAGCGTTGGTGAATAAGAGTTGTGATTTCTTGAGGAGTGAGTATGGTGTGCCGCCGCACTGGCGACAGGACGAGAACAAGGGAATGGTCAGGAGCCGAGACGGCCGGTGGATCCTGCCCGAGCGGCCTAGGATGATGGCTCATCCACCGGACACGGCGCTTCATCTTGAGCAtttttaa 1539 0.5023 MPYMASFLVSPIHNHPTTTFPCLIFHPTTPIFHNPLSLQNNKLSSPQSFIKCSISSLRPRDQEYLHQKSRDEDGEEEEEEELEEEILLSHEPPLNQVWKQIQGSNDWEGLLDPMNPHLRREIIRCGELAQACYDSFDFDPHSKYCGTCKYHPSHFFEKLLMEEKGYTISRYLYATSNINLPNFFQKSSIASVWSPHANWMGYVAVSTDEDEIQRLGRRDIVIAWRGTVTYIEWIYDLKDILTPANFTNDPTIKIESGFYDLYTKKEDACSYCYFSAREQILSEVKRLVQYYEDEELSITITGHSLGAALAVLSAYDIAELKLNVIENGDVTAKIPVTVFSFAGPRVGNLKFKERCEELGVKVLRVINVHDMVPTVPGIITNEKFQFQKYIEDALSFPWSYAHVGVELALDHRESPFLKATGDLGCAHNLEAHLHLVDGYHGKKRRFRLASKRDIALVNKSCDFLRSEYGVPPHWRQDENKGMVRSRDGRWILPERPRMMAHPPDTALHLEHF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01136 512 Coils Coil 65 85 - -
Aip03g01136 512 Pfam Lipase (class 3) 221 378 IPR002921 GO:0006629
Aip03g01136 512 PANTHER PHOSPHOLIPASE A1-IGAMMA3, CHLOROPLASTIC 38 510 - -
Aip03g01136 512 Gene3D alpha/beta hydrolase 97 502 IPR029058 -
Aip03g01136 512 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 38 510 - -
Aip03g01136 512 CDD Lipase_3 171 412 - -
Aip03g01136 512 SUPERFAMILY alpha/beta-Hydrolases 120 440 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01136 Aip-Chr3 11197820 11199428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01136 94 511 Acyl Lipid Metabolism Gene Families AT1G51440 73.364 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01136 - - gmx:100795661 741.11