Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01134 ATGTCGTCGTTCGCTTTCTCTTTCACTCCAGCTCCCTCCTCCTCCTCCTCCACCTATTCCCCTTTTTCTTCTTCCAAAACTAACCCTCCCTTCTTCGCTTCCTTTTCTTCTTCTTCTTCCTCATTTTCTCTTCGTCTTGCTTCACCTCCCTCCTTTTCTTCCTTCTCTTTCGGAATCAACCGCCGCACAGATCCCGCTTTCGTTCTCCATTCCACCGTCGAAGTCGCCGGCGGCGGCGGCGATCACGGATCCATCGGCGGCGGTCATGGAGGAGGTGGTCACGGCGGAGACGACGACGGCAATGCGGGCGAGCACGGGAGGAAGAAGGAGGCGATGATGGTGCTGGCGGAGGCAGGGAGGTCGTTGGAGAGCGTGCCTTCAGACTTGGCGGCCGCCATCAAGGACGGAAAGATCCCCGCCTCCGTGGTGTCACGGTTCTTGGAGCTTGAGAAGAATCCATTCTTCCGGTGGCTTCTTCAGTTTGGTGGATTCAAGGAGCGTCTTCTTGCCGATGATCTCTTCCTCGCTAAGGTTGGCATGGAGTGTGGCGTTGGCATCTTCACCAAGACTGCCGCTGAGTATGACCGCAGGAGAGAAAAATTCTTTGACGAGCTGGAAATAGTTTTCGCAGATGTGGTGATGGCCATACTTGCAGATTTCATGTTGGTTTATCTTCCTGCACCTACCGTGTCTCTTAGACCGCCGCTTGCAATCAATGCAGGCCCCATTGCTAAGTTCTTCCACAACTGCCCGGATAATGCATTCCAGGTTGCTCTCTCTGGGACATCATATTCTTTGTTACAGAGGTTTGGTGCAATAGCGCGTAATGGGGCTAAGCTTTTTGCTGTTGGATCTGCATCATCACTGGTCGGGACAGCTGTGACAAATGCCTTGATTAATGCAAAGAAGGCTGTTGATAAGTCTTCCTCTGGAGAAATCGAAAATGTTCCAATATTATCTACCAGTGCTGCCTATGGTGTCTATATGGGAGTTTCTAGCAACCTCAGGTACCAAGTACTTGCTGGAATTATAGAACAAAGGATTTTGGAACCATTGCTGCACCAGCACAAACTCATGCTCAGCGCGCTTTGCTTTGCTGTTAGAACCGGCAACACTTACTTGGGTTCATTATTGTGGGTGGATTATGCTCGATTTATCGGGGTTCAGTAG 1170 0.5094 MSSFAFSFTPAPSSSSSTYSPFSSSKTNPPFFASFSSSSSSFSLRLASPPSFSSFSFGINRRTDPAFVLHSTVEVAGGGGDHGSIGGGHGGGGHGGDDDGNAGEHGRKKEAMMVLAEAGRSLESVPSDLAAAIKDGKIPASVVSRFLELEKNPFFRWLLQFGGFKERLLADDLFLAKVGMECGVGIFTKTAAEYDRRREKFFDELEIVFADVVMAILADFMLVYLPAPTVSLRPPLAINAGPIAKFFHNCPDNAFQVALSGTSYSLLQRFGAIARNGAKLFAVGSASSLVGTAVTNALINAKKAVDKSSSGEIENVPILSTSAAYGVYMGVSSNLRYQVLAGIIEQRILEPLLHQHKLMLSALCFAVRTGNTYLGSLLWVDYARFIGVQ 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01134 389 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 4 389 - -
Aip03g01134 389 PANTHER PROTEIN RETICULATA-RELATED 4, CHLOROPLASTIC 4 389 - -
Aip03g01134 389 MobiDBLite consensus disorder prediction 79 107 - -
Aip03g01134 389 Pfam Protein RETICULATA-related 166 343 IPR021825 -
Aip03g01134 389 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01134 Aip-Chr3 11161015 11163770 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01134 - - gmx:100811998 499.59