Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01132 ATGGATAATTTAAAAGCTTCGTACAAAGACGAAGAGGAAGAAGACGGGGCACCAACCACCGCTGTAACAACCACCAGCACCGCCTCCGACACGCCAACGGAAGCCCAAAACGACGGCAGATCGGAGCCCGACCCTTCCGACATGTCTGATGACGAACCCGTCTCTGACGAAGGTTCCCTGAAGAAGTCGCCGAAGTCGCCTGCAAGAGACGATGGCGGCGGCGGTGACAACGACGAGGACGACGAGGAACCTCCACCGAAGAAGCAGAAGCAGCTCTCCAAATTGACCGCTGAAACCGTTACCGTTAAGATCGAATCTTCTCCGGTAGCTGCGGAATTGCCAGAAGGAGCTAGCAACGGCGACGCCAATGCGGCCGTGTCAACGCCGGCCACAACGGCCACGGGAACAACGGGGACGAATTCGAAGAAATCTAAGAAGAAGAACAACAATGTGTGGGTAACGAAATCGAAGAAATCAAAGAAGAAGAACAAGGCTAACAACAATAACAACAATCACCACGGCGCAAACGGCGAAGACACGGTGCTTATAACGCCGGTGCCAAGGTTCCCAGACAAGAGCGACGACACGGCGGAGATGAAGATCTGCCTCTCGAAGGTGTACAAGGCGGAGAAGGTTGAGCTGAGCGAGGACCGAATGGTGGCAGGGAGCACGAAGGGCTACAGAATGGTGAGGGCAACGAGAGGGGTGGTTGAAGGAGCGTGGTACTTCGAAATTAGGGTTTTGCATTTGGGGGAAACAGGGCACACACGGTTGGGGTGGTCCACTGAGAAAGGTGACTTGCAGGCACCGGTTGGTTACGATGGGAATAGTTTTGGGTATAGGGATATTGATGGGAGTAAGGTGCATAAGGCTCTGAGGGAGAAGTATGGAGAAGAAGGGTATAAGGAAGGTGATGTTATTGGTTTCTATATCAACTTGCCTGAAGGGGAGAAGTATGCCCCAAAGCCACTGCATTTGGTTTGGTATAAAGGACAGAGATATGTTGTTGCTCAAGATGCTAAGGAAGATCCTCCCAAAGTTGTGCCTGGAAGTGAGATATCTTTCTTCAAAAATGGCGTGTGCCAAGGTGTAGCTTTCAAGGATCTTTTTGGTGGTCGATACTACCCTGCTGCTTCAATGTATACTCTCCCCAATGAACCAAACTGCATGGTCAAGTTCAACTTTGGCCCCGACTTTGAATTCTTTCCTGAGGATTTCCAAGATCGGCCGATTCCCAAGCCAATGATCGAAGTTCCCTACCATGGTTTTGATAATCGAGTTGAAAATGGAGAGGCCACTGAGAAGAAACCGTGA 1314 0.5084 MDNLKASYKDEEEEDGAPTTAVTTTSTASDTPTEAQNDGRSEPDPSDMSDDEPVSDEGSLKKSPKSPARDDGGGGDNDEDDEEPPPKKQKQLSKLTAETVTVKIESSPVAAELPEGASNGDANAAVSTPATTATGTTGTNSKKSKKKNNNVWVTKSKKSKKKNKANNNNNNHHGANGEDTVLITPVPRFPDKSDDTAEMKICLSKVYKAEKVELSEDRMVAGSTKGYRMVRATRGVVEGAWYFEIRVLHLGETGHTRLGWSTEKGDLQAPVGYDGNSFGYRDIDGSKVHKALREKYGEEGYKEGDVIGFYINLPEGEKYAPKPLHLVWYKGQRYVVAQDAKEDPPKVVPGSEISFFKNGVCQGVAFKDLFGGRYYPAASMYTLPNEPNCMVKFNFGPDFEFFPEDFQDRPIPKPMIEVPYHGFDNRVENGEATEKKP 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01132 437 MobiDBLite consensus disorder prediction 1 16 - -
Aip03g01132 437 MobiDBLite consensus disorder prediction 148 167 - -
Aip03g01132 437 ProSiteProfiles B30.2/SPRY domain profile. 181 400 IPR001870 -
Aip03g01132 437 Gene3D - 199 413 IPR043136 -
Aip03g01132 437 MobiDBLite consensus disorder prediction 1 183 - -
Aip03g01132 437 SMART SPRY_3 238 399 IPR003877 GO:0005515
Aip03g01132 437 MobiDBLite consensus disorder prediction 18 39 - -
Aip03g01132 437 SUPERFAMILY Concanavalin A-like lectins/glucanases 201 403 IPR013320 -
Aip03g01132 437 Pfam SPRY domain 241 317 IPR003877 GO:0005515
Aip03g01132 437 MobiDBLite consensus disorder prediction 121 147 - -
Aip03g01132 437 CDD SPRY_Ash2 212 399 - -
Aip03g01132 437 MobiDBLite consensus disorder prediction 54 73 - -
Aip03g01132 437 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 27 421 IPR037353 GO:0048188|GO:0051568
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01132 Aip-Chr3 11140785 11145090 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01132 K14964 - gmx:100816796 511.916