Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01129 ATGCTTTCTCGTTTGATTCCAAAACCCTACTCCCATCTCAGACGCTTCCTCTCTCCCTCCCCAAAACCCTACACGTTCCCGCCGCAAACAAAAATCCCCAATTTGCCCCTCAATCCCTTCTTCACCGCCACTCCCAAACCCTTCTCCACCAACAACAATAACAATGGCAAGGGGAAGGACCCGTATTCTCCACCCGCGTGGAAGGACTTTCGCGACACTGAAGAAAATTTCCCTGCTTTCTTCGACGATGAAGAAATGAACAACATGCCTCCGGGGGAAAATCGAGGAGGAGAAGAAGAAGGTTTTCCTTTGGGGAGGAAGGAGGAGAATAAGGTGGTGGAGGAGGAGAAATGGTACTTGCAAGAGAAGGGTGTTGATGATGAAGATGAGAGTTCAATATTCAAAGGGATTGATAATGAGGAAAATAAAGTAAAAGATGGTTCTGGTGGGCACCTTGGGGTGGGTGCATCGGATTTTCAACCTTGGAGCTTGAAGGAGGAGAAGGATGGTGATGAAGTGAAGGAAGATGATGTGTTTGTTTTTCAAGACGATAATATTGAAGGGATGAAGGGTGAGTTCAGTGCTGTGGAAGGTGAAAGAAGTAAAGAAGATATTGAGAAGCTTGAGAAGGAAGAGAAAGAGCTCACTGCTGTACTCAAAGGCCCAAACCGAGCTTTTGGTGATTTGATTGCTGCTTCTGGAATCACGGATGAAATGCTTGACAGTTTGATTGCGTTGAAAGACTTAGAAGGAGTCGAGGGATTGCCCCCTCTTAGAGTAATAGAAGACATGCGCTATGAGAGGAATACTAGAAAATCCACTAGAGCTGAAATGGAGCGTCTAAAGCAAGAGGAAGCTGCAAAAGCAAGAGTGAGACAAGTTGACGAGAAAGGACGTGCTTATGGAACTGGAAGAAGAAAATGTAGCATAGCACGTGTCTGGGTTCAACCTGGTGATGGTAAATTTATTGTTAATGATAAAGAATTTGATGTTTATTTCCCTATGCTTGAGCATCGTGCTACTCTCCTTCGACCTTTCTCCGAGACAAAGACATTAGGACTTTGGGATGTCAGTTGTACTGTAAAAGGAGGCGGTGTTTCAGGTCAAGTTGGAGCAATACGATTGGGAATCAGCAAGGCTTTGCAAAGCTGGGAACCAGATTTGCGTCCTGCACTAAGAAACGCTGGCTTCCTGACAAGGGACGCAAGAGTGGATTTGATGGCCAATGATGATACTGTAATTGTAGAAAATTTTGTTTACCCGGAATTATCATATCATATTGTTATGATTCATTCACTTTTTGGAGAGAACTCTTGGCTTGAACAAGCTATGCAAAAGATAAATGTGTTCAACAGGCATGTAAAACGAAGACGACGACGAAGAACAAAGTGGGAGAAGGAAGAAGATAAAGCAATGAAGGTGGTTCCGTTCACGCTGCTTGCTTTGCTTCTTGTTGCTATTGTTCCAAATGGATTGTTGGCAGTTCCTTCTACGGTCCCTGCATTTCTTTGGTCTTCCCATTATGACCTGGTTTCAGAAAATGGCATGAAGGATTCTGTAAATTATCAGATCATTTCTCCAAAAGATCTAGCAAAGTCTGTTTTAGCTGAAGCTGGCTGGTCAAATTTTCTGTGCAATGGAAAGGAATTTCAGGAGCCTTTGGATCTGGCCCTTTTATTCATTGGTAGAGAGTTACAATCGTCAGATTTAAGCATGAGCAATCATGAAGACTCAACTCTTTTAGACTTGCTCAAGCTGTCTTTCACCAGGTCCAACATTTCCATGGCATTTCCATATGTTTCTTCATCAGAGGATGAGAATTTGGAAAAACAATTGGTTTCAGGATTCGCTGAATCCTGTGGAGATGATTTGGGAATTGGCAAAGTTGTATTCCTTGGATCTTGCTCCATGGATGATACAAATGATGAAGACAGTGCTGCTTTTCACTCTGTTCAGGAATATTTGAACAAGAAGATGGAAGGGAGTCGTACTGGGAAAACAGATTTGCTTGTGTTCTGTAATGGAGGTTCTCAACCTCTTAACATTGATGAGAAGCCAAAATCTGAAGGTGAAGTTTTATCTGGGCTTGTCAGCTCTGTTGATAAATCTGGGGCCAAATATGCAGTTCTTTATGTGTCAGATCCCTCCAGGTTGGTCCGGTATCCTTCTTACAGGGAACTACAAAGGTTTCTAGAAGAAACCACAAATGCGTCACTGACAGCCAATTCCACAGTTTGCGATAGAGTCTGCCAGATTAAGTCCTCTCTTCTGGAGGGAATTTTAGTGGGAATCGTTTTGCTAATAATCCTGATCTCTGGCCTTTGCTGTATGATGGGAATTGATACCCCAACGAGATTTGAGACTCCACAAGAGCAATGA 2379 0.4313 MLSRLIPKPYSHLRRFLSPSPKPYTFPPQTKIPNLPLNPFFTATPKPFSTNNNNNGKGKDPYSPPAWKDFRDTEENFPAFFDDEEMNNMPPGENRGGEEEGFPLGRKEENKVVEEEKWYLQEKGVDDEDESSIFKGIDNEENKVKDGSGGHLGVGASDFQPWSLKEEKDGDEVKEDDVFVFQDDNIEGMKGEFSAVEGERSKEDIEKLEKEEKELTAVLKGPNRAFGDLIAASGITDEMLDSLIALKDLEGVEGLPPLRVIEDMRYERNTRKSTRAEMERLKQEEAAKARVRQVDEKGRAYGTGRRKCSIARVWVQPGDGKFIVNDKEFDVYFPMLEHRATLLRPFSETKTLGLWDVSCTVKGGGVSGQVGAIRLGISKALQSWEPDLRPALRNAGFLTRDARVDLMANDDTVIVENFVYPELSYHIVMIHSLFGENSWLEQAMQKINVFNRHVKRRRRRRTKWEKEEDKAMKVVPFTLLALLLVAIVPNGLLAVPSTVPAFLWSSHYDLVSENGMKDSVNYQIISPKDLAKSVLAEAGWSNFLCNGKEFQEPLDLALLFIGRELQSSDLSMSNHEDSTLLDLLKLSFTRSNISMAFPYVSSSEDENLEKQLVSGFAESCGDDLGIGKVVFLGSCSMDDTNDEDSAAFHSVQEYLNKKMEGSRTGKTDLLVFCNGGSQPLNIDEKPKSEGEVLSGLVSSVDKSGAKYAVLYVSDPSRLVRYPSYRELQRFLEETTNASLTANSTVCDRVCQIKSSLLEGILVGIVLLIILISGLCCMMGIDTPTRFETPQEQ 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01129 792 PANTHER 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE 472 791 - -
Aip03g01129 792 Coils Coil 264 284 - -
Aip03g01129 792 Coils Coil 198 218 - -
Aip03g01129 792 MobiDBLite consensus disorder prediction 44 59 - -
Aip03g01129 792 MobiDBLite consensus disorder prediction 82 109 - -
Aip03g01129 792 ProSitePatterns Ribosomal protein S9 signature. 363 381 IPR020574 GO:0003735|GO:0005840|GO:0006412
Aip03g01129 792 Gene3D - 292 407 IPR014721 -
Aip03g01129 792 MobiDBLite consensus disorder prediction 44 69 - -
Aip03g01129 792 Pfam V0 complex accessory subunit Ac45/VOA1 transmembrane domain 756 787 IPR046756 -
Aip03g01129 792 Pfam Ribosomal protein S9/S16 304 404 IPR000754 GO:0003735|GO:0005840|GO:0006412
Aip03g01129 792 SUPERFAMILY Ribosomal protein S5 domain 2-like 299 404 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01129 Aip-Chr3 11089417 11095784 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01129 K02996 - gmx:100797241 487.648