Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01104 ATGAATGCTGAATCAGAACCATCAAGCGTTAAAGACAAACTTCATCAATTTCAAAGATGTGATACAAATCCGGTTTCCAGAAGTTTGCATGAAAATCTTCTTAAGATTGCCTTATGGTCTCGATCAAACAGTACAAGCTCTTCTTTGGCAACAGACAACACCACTAATGATGCACGGTTCAAGGGCCATGATATGCTTGCGCCTTTCACAGCTGGGTGGCAGACAACTGATGTGAATCCTTTGGTTATAGACAAGTCAGAGGGAAGCTATGTATATGACATTAATGGGAAGAAGTATCTTGACTCACTTGCTGGTCTATGGTGCACAGCTCTAGGGGGGAATGAGCCACGTCTAGTTGAAGCTGCCACTGCACAACTGAACAAATTGCCATTTTACCATTCCTTTTGGAATCGGACTACAAAACCCTCTCTGGATCTAGCCAAGGACCTCCTAGAAACGTTCACAGCCAGAAAGATGGCTAAAGCTTTTTTTGTTAATAGTGGATCAGAAGCAAATGACACTCAGGTGAAACTTGTATGGTATTATAACAACGCACTTGGAAGACCAAATAAAAAGAAATTCATAGCTCGTGCTAAATCGTATCATGGTTCAACATTGATAGCAGCCAGTCTTTCTGGACTTCCAGCTCTGCATCAAAAATTTGATCTGCCTGCTCCTTTTGTCTTACACACTGATTGTCCACATTACTGGCGGTTTCATCTTCCAGGTTGTGAGACAGAGGAAGAGTTTTCAACCAGATTAGCCAAAAATCTAGAGGAGCTAATTCTGAAAGAGGGACCAGATACAATTGCTGCATTTATTGCTGAGCCAGTTATGGGGGCAGGAGGTGTAATACCTCCACCTGCAACTTATTTCGAAAAGATCCAAGCTGTTGTCAAGAAGTATGACATTCTTTTTATTGCTGATGAGGTGATCTGTGCCTTTGGAAGACTTGGAACAATGTATGGATGTGACAAGTATGGCATCAAGCCCGATCTTGTCTCCTTAGCAAAGGCACTCTCGTCTGCATATTTGCCAATTGGAGCAGTTCTTGTGAGTCCAGAAGTTTCAGAAGTTATACACTCACAGAGCAACAAGCTTGGTTCATTTTCCCATGGGTTTACTTACTCTGGACACCCTGTATCCTGTGCTGTTGCAATTGAAGCACTGAAGATCTACAAAGAAAGAAATATTGTCGAGAAGGTGGCAAATATCTCCCCAAGGTTCCAAGATGGTGTAAAAGCTTTTGCTGACAGTCCTATCGTTGGAGAGATCCGAGGAACTGGCTTAATTTTGGGTACCGAGTTCACAGACAACAAGTCACCTAATGATCCATTTCCTCCTGAATGGGGCAAATGTGTCATATTTTCTATAATTTGTTGTGACATAATGATGTTTGTTACAGGGATTGGTGCCTATTTTGGAGCACAATGTGAGAAGCATGGTATGTTAGTTCGTGTAGCTGGGGATAACATTATGATGTCTCCACCGTTCATCATTTCTCCTGAAGAAGTTGATGAGTTAATAAGCATTTATGGGAAAGCCCTAAAAGGTACGGAAGAGAGGGTGAAAGAGCTCAAGTCTCAGCGGAAGTAG 1596 0.4217 MNAESEPSSVKDKLHQFQRCDTNPVSRSLHENLLKIALWSRSNSTSSSLATDNTTNDARFKGHDMLAPFTAGWQTTDVNPLVIDKSEGSYVYDINGKKYLDSLAGLWCTALGGNEPRLVEAATAQLNKLPFYHSFWNRTTKPSLDLAKDLLETFTARKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGCETEEEFSTRLAKNLEELILKEGPDTIAAFIAEPVMGAGGVIPPPATYFEKIQAVVKKYDILFIADEVICAFGRLGTMYGCDKYGIKPDLVSLAKALSSAYLPIGAVLVSPEVSEVIHSQSNKLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEKVANISPRFQDGVKAFADSPIVGEIRGTGLILGTEFTDNKSPNDPFPPEWGKCVIFSIICCDIMMFVTGIGAYFGAQCEKHGMLVRVAGDNIMMSPPFIISPEEVDELISIYGKALKGTEERVKELKSQRK 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01104 531 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 306 343 IPR005814 GO:0008483|GO:0030170
Aip03g01104 531 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 25 526 - -
Aip03g01104 531 Coils Coil 516 531 - -
Aip03g01104 531 CDD OAT_like 80 516 IPR005814 GO:0008483|GO:0030170
Aip03g01104 531 Gene3D Aspartate Aminotransferase, domain 1 81 516 IPR015422 GO:0003824
Aip03g01104 531 Gene3D - 115 398 IPR015421 GO:0003824
Aip03g01104 531 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 25 526 - -
Aip03g01104 531 SUPERFAMILY PLP-dependent transferases 66 517 IPR015424 -
Aip03g01104 531 Pfam Aminotransferase class-III 79 515 IPR005814 GO:0008483|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01104 Aip-Chr3 10727068 10734500 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01104 K16871 - pvy:116112175 864.374