Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01068 ATGGGAGGAGTTAGAATGCACACGAAATCCGACTCCGACGTAAGCATCGACCAATCAACATCGTCGCCACCGCGATCTCCACGCCGTCCACTGTACTACGTCCAAAGCCCATCCAACCATGACGTCATCGAGAAGATGTCGTACGGCTCCTCCCCCGCCGCATCACCGCAGCACCACCACCACTACTATGTCTGCTCCCCCGTCCACCATTCCCGCGAGTCCTCCACCTCTCGTTTCTCCGCCTCTCTCAAGAACCCTAGCCGCCACCCTCACCACCACCACCACACCTCCTCCTCCTTCGCACCCTGGAAGAAGCTCAGCCGCCACGATTCCGAAGCCGCCGGTGACGACGACGACGACGACGACGACGCATATGATGACTCCGGCCGTAACATCCGCCTCTACTTCTGCTTCTTCCTCCTCTTCGTGGTCCTGTTCTCCGCGTTCTCTCTTATCCTTTGGGGTGCCAGCAAGAGTTACAAGCCTCGCGTCACCGTTACGAACATGGTGTTCTGGAATCTGAATGTACAATCTGGGAACGACGGAACGGGGGTGCCAACGGATATGCTGTCATTGAACTCAACGGTGAGGATCTCATACAGAAACCCTGCCACCTTTTTCGGCGTCCACGTCACCTCCACCCCTCTTCAGCTCAACTATTATCAACTCAAACTAGCCTCCGGCCAGATGCAGAAGTTCTATCAGCACAGGAAGAGTCAGAGGAAGCAAGTGGTAGTGGTGTTAGGCCACCAGATTCCACTCTACGGCGGGGTGTCGGTTCTCGGTGACACGAAACAGCACATGGAGAGTGTTGCATTGCCATTAAACCTCACATTTGTGGTGAGATCAAGGGCTTATATCCTCGGAAGATTGGTCAAGTCCAAATTCTACACAAGAATCCGATGTCCGGTCACCTTGCATGGTAACAAACTTGGAAAACCTCTTCACTTGATCCATTCATGTCTCTACGATTGA 975 0.5395 MGGVRMHTKSDSDVSIDQSTSSPPRSPRRPLYYVQSPSNHDVIEKMSYGSSPAASPQHHHHYYVCSPVHHSRESSTSRFSASLKNPSRHPHHHHHTSSSFAPWKKLSRHDSEAAGDDDDDDDDAYDDSGRNIRLYFCFFLLFVVLFSAFSLILWGASKSYKPRVTVTNMVFWNLNVQSGNDGTGVPTDMLSLNSTVRISYRNPATFFGVHVTSTPLQLNYYQLKLASGQMQKFYQHRKSQRKQVVVVLGHQIPLYGGVSVLGDTKQHMESVALPLNLTFVVRSRAYILGRLVKSKFYTRIRCPVTLHGNKLGKPLHLIHSCLYD 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01068 324 MobiDBLite consensus disorder prediction 85 99 - -
Aip03g01068 324 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 61 323 - -
Aip03g01068 324 MobiDBLite consensus disorder prediction 75 103 - -
Aip03g01068 324 MobiDBLite consensus disorder prediction 40 54 - -
Aip03g01068 324 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 61 323 - -
Aip03g01068 324 MobiDBLite consensus disorder prediction 1 55 - -
Aip03g01068 324 Pfam Late embryogenesis abundant protein 197 302 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01068 Aip-Chr3 10527082 10530366 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01068 - - gmx:100817846 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01068 03 10527082 10530366 Aip03g01068 03 10527082 10530366 ECH