Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01052 ATGGGAGATGAAGGTATCATGAGAGGTGTCACAAAGCAAGTCAACCCTGGGAAGGCTTCCATATTAGCTCTTGGCAAGGCATTCCCACACCAACTTGTCATGCAAGAATACTTGGTTGATGGATATTTTAGGGACACTAACTGTGACAATCTTGAGCTCAAACAGAAGCTAAGCAGACTTTGCAAGACAACAACAGTGAAAACAAGGTATGTGGTCATGTCTGAGGAGATACTAAGGAAGTACCCAGAACTTGCGCTTGAAGGCCTTCCAACGGTGAAGCAAAGGCTAGAGATATGTAACAAGGCAGTGACACAAATGGCAATTGAAGCCTCCCAGGTTTGCATCAAGAACTGGGGTAGATCCTTATCTGACATAACACACTTGGTTTATGTCTCATCAAGTGAAGCTAGACTACCAGGTGGTGACCTTTATCTAGCCAGAGGACTAGGACTCAGCCCTGCGACTCAACGAGTCTTGCTCTATTTCGTGGGGTGCTCAGGGGGTGTGGCCGGCCTACGTGTTGCAAAAGACATAGCCGAGAACAACCCTGGTAGCAGAGTGCTTCTAGCTACTTCTGAGACTACAATCATTGGGTTCAAACCACCAAGTGCAGATAGACCCTATGATCTTGTTGGGGTGGCTCTCTTTGGTGATGGCGCTGGTGCAATGATAATTGGCTCAGACCCAATAGAGGGTACTGAGAAGCCTCTCTTTGAGCTTAACACAGCAATTCAAGAGTTTCTGCCAGACACTGAGAAGAAAATTGATGGAAGATTGACTGAGGAGGGGATAAGCTTCAAGTTAGCAAGAGAACTTCCTCAAATAATTGAGGACAATGTGGAAGATTTCTGTGACAAGTTAATGAGTGTTGCTGGATTCCAGAACAAGGAGTATAATAAGCTGTTCTGGGCAGTGCATCCAGGTGGCCCTGCAATCTTGAACCGCATAGAGAAGAGGCTCGACTTGCTGCCAGAGAAGTTGAATGCAAGTAGAAAGGCTTTGATGGATTATGGAAATGCTAGCAGCAACACCATTGTGTATGTGCTGGAATACATGCTAGAAGAGGCCATTAAGATTAGAAAGGATGGTGGAGATGATCCTGAATGGGGCATGTTGCTTGCTTTTGGACCTGGGATCACTTTTGAAGGGATTCTAGCAAGGAACCTGTGTAATTAA 1176 0.4566 MGDEGIMRGVTKQVNPGKASILALGKAFPHQLVMQEYLVDGYFRDTNCDNLELKQKLSRLCKTTTVKTRYVVMSEEILRKYPELALEGLPTVKQRLEICNKAVTQMAIEASQVCIKNWGRSLSDITHLVYVSSSEARLPGGDLYLARGLGLSPATQRVLLYFVGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPIEGTEKPLFELNTAIQEFLPDTEKKIDGRLTEEGISFKLARELPQIIEDNVEDFCDKLMSVAGFQNKEYNKLFWAVHPGGPAILNRIEKRLDLLPEKLNASRKALMDYGNASSNTIVYVLEYMLEEAIKIRKDGGDDPEWGMLLAFGPGITFEGILARNLCN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01052 391 PANTHER TYPE III POLYKETIDE SYNTHASE B 13 389 - -
Aip03g01052 391 SUPERFAMILY Thiolase-like 216 387 IPR016039 GO:0016746
Aip03g01052 391 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 13 389 IPR011141 GO:0009058|GO:0016747
Aip03g01052 391 PIRSF PKS_III 7 390 IPR011141 GO:0009058|GO:0016747
Aip03g01052 391 CDD CHS_like 19 385 - -
Aip03g01052 391 Pfam Chalcone and stilbene synthases, N-terminal domain 11 229 IPR001099 -
Aip03g01052 391 SUPERFAMILY Thiolase-like 13 233 IPR016039 GO:0016746
Aip03g01052 391 Gene3D - 237 388 IPR016039 GO:0016746
Aip03g01052 391 Gene3D - 5 236 IPR016039 GO:0016746
Aip03g01052 391 Pfam Chalcone and stilbene synthases, C-terminal domain 239 389 IPR012328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01052 Aip-Chr3 10243961 10245512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01052 87 351 Miscellaneous Gene Families AT4G34250 24.324 5.81e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01052 - - vun:114168705 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01052 03 10243961 10245512 Aip03g01052 03 10243961 10245512 ECH