Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01039 ATGGCTTCCGTCAAAACCTTCTGGATTTTCTCTCTCGTTCTTCTCCTCCTCGCTTCTCCTTTCGTTCAAGTTGCTAGGTGCCAGTCTGATTCAGATTCAGATGAAGCTGTGGACACTACCACTGAAGAATCAAATGATATTGGCATCGTTGGTGATGATGTCCAAGATTTTGGTGATGCAACGACCTTCCCTGCTGCTCCTGGAGTTGATACCATATGTGTTTTTCCGAAAAATAGTGCAAGACTGATAACAGCTGGAGAAGAGACAGAACTGCTTGTTGGTTTGAAAAATGATGGTGATTCGAGCATGAATGTCATTGCAATTAGGGCTAGTGTTCACCTGCCGTTTGATCATCGTCTGCTTGTCCAAAATCTTACTGCTCAGGTTTTCAACAATGGTACCGTGCCAGCTTCTGCACAGGCTACATTCCCATATGAATTTGCTGTAAGCAAGTTCTTGCAGCCTGGAACTTTTGACCTTGTTGGCACTATTTTGTATGAGATAGACCAGCATCCTTACCAGAATACCTTCTTTAACGGCACTATTGAAGTTGCCGAGGCCGGTGGCTTTCTTAGCATGGAATCTGTCTTCCTTGTTACTCTTGGAATTGCCCTCCTCGTCCTCCTGGGGCTATGGATTCATGGTCAAATACAACACCTATCTAAGAAAACAAAGAGGGCTCCAAAGGTTGAAGTTGGGACTAGATCAACAGATGCTTCAATGGATGAATGGCTCGAGGGAACTGCATATGCTCAGTCCAATGCAAACAAATCAAAGAAGAAGAAGTAG 789 0.4423 MASVKTFWIFSLVLLLLASPFVQVARCQSDSDSDEAVDTTTEESNDIGIVGDDVQDFGDATTFPAAPGVDTICVFPKNSARLITAGEETELLVGLKNDGDSSMNVIAIRASVHLPFDHRLLVQNLTAQVFNNGTVPASAQATFPYEFAVSKFLQPGTFDLVGTILYEIDQHPYQNTFFNGTIEVAEAGGFLSMESVFLVTLGIALLVLLGLWIHGQIQHLSKKTKRAPKVEVGTRSTDASMDEWLEGTAYAQSNANKSKKKK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01039 262 Pfam Translocon-associated protein (TRAP), alpha subunit 9 249 IPR005595 GO:0005789
Aip03g01039 262 PANTHER - 6 262 - -
Aip03g01039 262 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT 6 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01039 Aip-Chr3 10063337 10066790 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01039 K13249 - gmx:100820543 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01039 03 10063337 10066790 Aip03g01039 03 10063337 10066790 ECH