Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01037 ATGGCGGAAACCTGCTCCGTCGACGCTTCCCTCTGGTGGGACTCATTCACTCTCTTCTTCACTCAGCTCGAAAACTTATCCCCCTCCTCAGATCTTCCACCAAATTTGGCGAAGAAGTTGAAGGAAAACCATTCGTGGTTCGCTGACTTGCTCTTGCGCTTCAAGCCCCCGAGTCAGAAGTCAAAGGAAGCTTTGAACTCGAAGAAGCTGAAAATTGGATCTCACGAGCTCACAGTTCAACCTGAGCTCAAAGATAAAGCTCTCCAGATTAGCTCCTACTTGCTACTAGATGAGGTTCAATCATACATACTTGTGGAAAGGTCCATTAAAAATAACAGTGTGGCTCCTAGTTTGATGTTTCCAGAGTTTCTTCACATGATGTTGATTCAATATTACATGGAGCGACAATGCTTGCTGAAGTGCATAAGGTGGATTCTCATGCATGCTATTTATATTGGTTCTATATCTGAAGACAATATTGTTAGGGAGGAGGCAAAAAAGCTGTTTGATAATCAGCTAGAAAGTAAGTTAGTATCATTCTTCGAGGACCATTTGTCTTGCAGCTTCCCCGAACAAATGGATGTTGATCTTTTTACTCTGTGGTCTGAGGAGATTCTAATTGAAGACAACTTGATTTTAGATATCCTTTTTCTTGGATACTATGACTCATTTTGTACATGTAGTGCTGAAATATGGAAGAGGTTTTGTTCTCTTTACAAGGGGATCTTACTTGGTGACTATAACTTGGGGAAGCTGGCAATAACTACAGAAGCACAACAGTTGTCTTACCATACTAAAGTTCAGCTGCTTCTTATTTTAATAGAAACACTGAACTTGGAGAATATGCTTCAAATGGTTCATGATGAAAGACCTTATAGGAAGGGTGTGTGTTCTTTTTCCTTGAATAATGTCCAAGAGATCGATGCACTAGTTTCTACTTTCAGTGGTTTTGAAATGAATGAAGCTGGTCCTCTTGTTCTAGCTTGGGCAGTATTTCTTTATCTGCTCTTGACACTTCCGGGTAAAAATGGGACCAATGAGCTAATGGAGATTGATCACATTGGTTATGTTCGTCAAGCCTTTGAGGCTGGATTCTTAAGTTACTGTCTTGAAATTCTTGAGTGTGACATCTTCAAGGAGTATGATGGCCCAGCATCTGGTTATCGCAGTGTCTTGAGGACATTCATATCTGCATTTATTGCATCTTATGAGGTCAACCTTCAGCTAGAGGACGGTAACCCTGCTTTGATACTGGATATTCTTTGCAAGATCTACCATGGAGAGGAGTCACTATGTACTCAGTTTTGGGATAAGGAAAGTTTTATTGATGGTCCAGTTCGGTGTCTTCTTTACAACCTGGAGAGCGAGTTCCCTGTCAGGACACTTGAACTTGTACGGCTCTTGTCATCCCTCTGTGAAGGCACTTGGCCTGCAGAATGTGTGTATAACTTTCTAGATAAGTCTGTTGGTGTATCATCCTTGTTCGAGATTAGCAGTGATTCACAGGTAGATGATGCCTCTCATATGGTTGAGGCACGACAGGCAGTGCAAGTTCCTGGAGTTGAGGGTTTTTTTATTCCTCCTGGTACTCGTGGGCGTGTCTTGAAATTTGTTGGAGAGGATACTGCCCTCGTGCGATGGGAGTATGCTCCATCTGGGGTGTTTCTTTTGCTCCTACGTTTGGCCCAAGATGTGTACTTGAATAACAAGGAGGAAGTTCTTTGCACGCTTGACCTGCTCAGCAGATTGGTGTCCTTTAATACTGCTGTCTGTTTTGCTGTGTTAGACATTAGCAACTCTCTACAGTTCCATGCTATTGGCCTGATGAACGAGCAGATTGAAAAGAATGTCTGGGTGGTTGAGATAATCTGTAATCTGGTTAAAAACCTGCCTCTGAATTCCTGTAGTGCTGCACTTATGTCAATGGCCATCAAGATCTTGGTGACTATGTTGATTTGTTCTCCAGCTAATGTTACAACAGTTGCTTTAAATGCAAATCTATTTGATATCAATTTGCAGACTGCCGTGTTCAGTGTAGGCAACAATGGCTTCTCAAGTGGGTCATGGTTGCTTTCTAGCAAACTGGCAAGGATGATTTTGACTGATTGTGAGATGAACAGTAGTGACTGCCCCTTGGCAATATCAGTGCTGGACTTCACCATACAGCTTGTAGAGACAGGGGTGGAGAATGATGCTCTCCTGGCACTGATCATTTTCTCTGTACAATTTGTCCTAGTCAATCACCAGTATTGGAAATACAAGATAAAGCAAACCAGATGGAAAATAATGTTGAAGGTTCTTGAATTGATGAAAAAATGCCTTGAGTCGATGCCCTGTTATGGAAAGTTGGGAGAGATCATACACAATGTGTTATTCTCTGATTCTTCCATCCACAACACACTCTTCCAAATTGCTTGCACTACTGCCCAAGCCTTGGAGAAACTGCATGTAAGCCGCCTCTTTGATCCAATGGAAATTGAGGGGATACAGCTTGCTATGGGATCTGTCTTGGACATTCTTGTGGTTATGCTGACTAGACTGTCAAAGGATAACTCTTCCAGCTTTCCCGTTTTTCTCCAAGCAGTGTTCTCATGCACAACCAAATCAGTTCCTCTTATCACTTCTGTTACTTCTTTGATTTCATACTTCCGGGATCCTGCCATCCAGTTGGGTGCTGTCAAGTTCATTTCAATGTTATTTGTCACGGCAGATTGTTGTCAACCATTTTCGTATGGAACCACGTTTTTTGCTCCTGATAATAAGGAGATTATGGATTTGAGGCGTTCTGCAAGCTACATACTGCAGGAGCAACTGGTATCAAATGAAGAGCTTTTTGTTGCAACACTTAATTTATTCACTTCTGCAGCACGTTACCAGGCTGCTTTTGTTGTTGCTATCTTTGCTCCAGATGCCGGCAATGAAGACCAACATAATACTGGGGATCCAAAGTCGCAAAGTAGTGAAACTTCTCTGGTACCACTAGTATCCAAAAAATCAAGTTTACTAGATGCGCTTATGCTCTACATTGAGAGGGCACGTGATCTGATCAAAAGCAAGCCTCGGATACTGCTTAGTGTACTTAACTTCATGGTCTCCCTGTGGCAAGGGTCTCCTCAATATGCAAATCTCTTAGAAATTTTGAGAAGCTATGGAAAGTTTTGGCGACACTTGGCCGACGCAATCTCAAATGTTTCCAACACTGAGATCCCTTTACTTGAAAGTGTTAAAGAAGAAGATGCTTGCAATCTAGCATACAGTTTCCATTGTCAATCTGCCATTCTCAGAATCATGGCATATGAATTGTTTTTGCAGAAAAAGTTGTTGCATGCAGAGTTACTTGGGAAAGATGAATCTAAGGACAAGGAGAAAAATGCCACAAAATCTGACAAATCTAATTCCACAGATTTTCATGAACTTAAGGGAATCTGGTCTTCATGGTTCAAAGATTCTGTCTTACAAAAACTAATAAAGTCATATACTTGTTGTGGATATAAGAATGATATATATTATGGTGCAAAGGTGGCCACCAATTCATTCTCTGTTCATGTGATGGAAAAATTAGCTGTTGGTGACTCAGGAAGTTTATCTGTGTCATTGCTTCAGAAGATTCATGGAAACCTCATAAAGTTGAGCATGCATCCTGCTTTCTCTGAATTGTTGTCTCAATATTCACAGCGCGGTTACAGTGAGGGAAAAGAACTGAAGAAGTTGATACTCAGTGACCTCTTTTATCATTTACAAGGAGAGCTTGAAGGGAGAAAAATTGGTATTGGACCATTCAAAGAACTATCTCAGTATCTCATTGAATCAAATTTTTTGGGAACCTACCAACACCAGTTCAATGAAGACTCTCTTGTGAAGAATGTATACTTGTTTGACCTGAAACGTTTGCGAGCAGATATTAAACTAGATGTGTGGGATTGTTCTCATTGGAGAGCATCTAGGGATATTGCAGAAACTATGTTGAGTTTTCTGCAGGATGCAAACTCAATTATGTTGCTGTCAAGTTCAAGGCTTTCTGCATCAAAAGGATTAATAGCTGTTTTGGCTGTTTGCCATGATAATTCGTTAGGGAAGGCTACTAAAGAAGAGGGGATCCCAGATGAACTTGTAATCTCTTGCATAGATAGTATTTGCAAGTCTTTGCTTGCAACAATTGAAACGTTATCACCTGTTCTTGATGCCTCCGAAGATGTATTCAATTTTCTTGCTTCTCAAGTAGAATTGCTTTTCCACTTGATGAGAACTGTCAGAAAGAGTATCCCCTTATCTGCATCCCTACTTGTTTTGAAATGTGCAAGTTCAGGTCTCAAGCTGTTGAGTGAAATTAAGAGGTTGCCTTCTGGGGCTGATGATATCATGGTGCTATTGCTGACATTGCTGCTTTTGGTACTACAGTTCAACTCCCTCAAATCACATTCAGATGGGGTGGCAGATGAGAGTTCTGACGAGAACTTCTCAAAGGTTTCAAATGCAACCCTAGGCCTGCTACCCGTTCTTTGCAATTGCATAACAACTTCAGAGCATGGTATGCTGTCACTGTCTGTTATAGACTTGATATTGAGAAGCTTCTTGATGCCCAGGACTTGGCTACCTATCCTGCAGAGTCATCTTCAGCTGCAGCTTGTTATGCTAAAACTCCAAGATAAAACTTCTCCCTCGATTCCAATGATATTGAAATTCTTTTTAACCCTTGCACGAGTTAGAGGGGGTGCTGAGATGCTTTATAGTTCTGGTTTCTTGTCGTCACTGAGAGTGTTGTTTGCCGAATCTTGTGAGATTTTCTCAAGAAGTGGAAGCCAGAATCCAGTCAGCTCATACGAGAAGTCTGAAACCCCCCAAGACATTTGGGGACTTGGATTAGCTGTGATTACATCTACTCTTCAATCCTTAGGAGACAGTTCTTCCGGAACTGCTATTGTGAACAGCATGATACCTTACTTTTTCTCAGAGAAGGCTCATCTTATTTTTTCTTCTCTAAATGCCCCAGCCCTTCCTTCCGATGATCATGACAAGAAAAGACCTCGGGCACAGAGATCAGGGATTTCTTTTGCCACTCTTAAAGAAACACAACATACTTTGATGCTCATGTGTGAGCTTGCAAAACATTGGAGTTTATGGATTAAGGCAATAAAAGATGTAGATAGACAGCTCAGAGAGAAATGTATCCATCTTTTAGCCTTTATTAGCAGGGGAACTCAACGTCTTGGTGATTTTTCAAGCCAGAATGCCCCTCTTTTGTGTCCACCTACTACAAAAGAGGATTTTGAAATTTTCTTGAACCCTTCATACATCAGTAGTAGAAAAGGATGGTTTGGTCTCTCACCACTTGGATGTGTGTCAAAACAGAAGATCTCTTCCTTGTCAACTGCAATATCTATCTCTGGTGAAGCATCTGAGAGTACTGATCCTTCTCCAAAAACACACTTTTCTGACGCTGTAGCTGTGCAGGTTTATAGAATCACATTTCTTCTATTAAAATTTCTCTGCTTACAAGCCGAGGGTGCTGCTAAAAGGGCTGAGGAGGTTGGCTTTGTTGATCTTGCACATTTTCCTGAGCTTCCTATGCCAGAAATTTTGCATGGACTGCAGGATCAAGCAATTGCTATTGTTACTGAGCTTTGTGAATCCAACAAACTGAGGGCCTCTCGAGACACACAGAACGTTTGCAACTTAATGCTGCAAATTTTTGAAATGGCCTTGCACTTAGAACTTTGTGTTCTACAAATTTGCGGCATAAGACCTGTATTAGGTCGTGTGGATGATTTTTCAAAAGAAGTCAAATCCTTATTCAGTGCAATGGAGGGCCATGCTTTTCTAAAAGCATCTAGCAAGTCTTTAAAACAGATGATATCGTGTGTCTATCCTGGATTGCTGCAGGCGGAGAATTTCATGTGA 5898 0.4125 MAETCSVDASLWWDSFTLFFTQLENLSPSSDLPPNLAKKLKENHSWFADLLLRFKPPSQKSKEALNSKKLKIGSHELTVQPELKDKALQISSYLLLDEVQSYILVERSIKNNSVAPSLMFPEFLHMMLIQYYMERQCLLKCIRWILMHAIYIGSISEDNIVREEAKKLFDNQLESKLVSFFEDHLSCSFPEQMDVDLFTLWSEEILIEDNLILDILFLGYYDSFCTCSAEIWKRFCSLYKGILLGDYNLGKLAITTEAQQLSYHTKVQLLLILIETLNLENMLQMVHDERPYRKGVCSFSLNNVQEIDALVSTFSGFEMNEAGPLVLAWAVFLYLLLTLPGKNGTNELMEIDHIGYVRQAFEAGFLSYCLEILECDIFKEYDGPASGYRSVLRTFISAFIASYEVNLQLEDGNPALILDILCKIYHGEESLCTQFWDKESFIDGPVRCLLYNLESEFPVRTLELVRLLSSLCEGTWPAECVYNFLDKSVGVSSLFEISSDSQVDDASHMVEARQAVQVPGVEGFFIPPGTRGRVLKFVGEDTALVRWEYAPSGVFLLLLRLAQDVYLNNKEEVLCTLDLLSRLVSFNTAVCFAVLDISNSLQFHAIGLMNEQIEKNVWVVEIICNLVKNLPLNSCSAALMSMAIKILVTMLICSPANVTTVALNANLFDINLQTAVFSVGNNGFSSGSWLLSSKLARMILTDCEMNSSDCPLAISVLDFTIQLVETGVENDALLALIIFSVQFVLVNHQYWKYKIKQTRWKIMLKVLELMKKCLESMPCYGKLGEIIHNVLFSDSSIHNTLFQIACTTAQALEKLHVSRLFDPMEIEGIQLAMGSVLDILVVMLTRLSKDNSSSFPVFLQAVFSCTTKSVPLITSVTSLISYFRDPAIQLGAVKFISMLFVTADCCQPFSYGTTFFAPDNKEIMDLRRSASYILQEQLVSNEELFVATLNLFTSAARYQAAFVVAIFAPDAGNEDQHNTGDPKSQSSETSLVPLVSKKSSLLDALMLYIERARDLIKSKPRILLSVLNFMVSLWQGSPQYANLLEILRSYGKFWRHLADAISNVSNTEIPLLESVKEEDACNLAYSFHCQSAILRIMAYELFLQKKLLHAELLGKDESKDKEKNATKSDKSNSTDFHELKGIWSSWFKDSVLQKLIKSYTCCGYKNDIYYGAKVATNSFSVHVMEKLAVGDSGSLSVSLLQKIHGNLIKLSMHPAFSELLSQYSQRGYSEGKELKKLILSDLFYHLQGELEGRKIGIGPFKELSQYLIESNFLGTYQHQFNEDSLVKNVYLFDLKRLRADIKLDVWDCSHWRASRDIAETMLSFLQDANSIMLLSSSRLSASKGLIAVLAVCHDNSLGKATKEEGIPDELVISCIDSICKSLLATIETLSPVLDASEDVFNFLASQVELLFHLMRTVRKSIPLSASLLVLKCASSGLKLLSEIKRLPSGADDIMVLLLTLLLLVLQFNSLKSHSDGVADESSDENFSKVSNATLGLLPVLCNCITTSEHGMLSLSVIDLILRSFLMPRTWLPILQSHLQLQLVMLKLQDKTSPSIPMILKFFLTLARVRGGAEMLYSSGFLSSLRVLFAESCEIFSRSGSQNPVSSYEKSETPQDIWGLGLAVITSTLQSLGDSSSGTAIVNSMIPYFFSEKAHLIFSSLNAPALPSDDHDKKRPRAQRSGISFATLKETQHTLMLMCELAKHWSLWIKAIKDVDRQLREKCIHLLAFISRGTQRLGDFSSQNAPLLCPPTTKEDFEIFLNPSYISSRKGWFGLSPLGCVSKQKISSLSTAISISGEASESTDPSPKTHFSDAVAVQVYRITFLLLKFLCLQAEGAAKRAEEVGFVDLAHFPELPMPEILHGLQDQAIAIVTELCESNKLRASRDTQNVCNLMLQIFEMALHLELCVLQICGIRPVLGRVDDFSKEVKSLFSAMEGHAFLKASSKSLKQMISCVYPGLLQAENFM 1965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01037 1965 PANTHER NUCLEOPORIN NUP188 HOMOLOG 5 1958 IPR044840 GO:0017056
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01037 Aip-Chr3 10030523 10047995 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01037 K14311 - gmx:100796560 2956.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01037 03 10030523 10047995 Aip03g01037 03 10030523 10047995 ECH