Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01034 ATGGAACTAACATGGTTGAGTGCCATTATTGTTGGTGCTGGATACCTTGCTTTGGGTTACTTCATTGGTTCCAAATACCCACCTCGCTTCCTCTTCTCATCTAAACTTTCCATTGACAACACCAACCGGAACAGCAACACGAAATCTAAACCCAAAGAGTCCCTTGAGATTGAACAGCTCGCTAACATTCTCGATGATTTCAAAATGGTATTGGTGGTAAGGAATGATCTTAAAATGGGCAAAGGGAAGATTGCTGCTCAATGCAGTCATGCAACTTTAGGCCTATATAAAAAGGTCCTTCATCGAGCACCAAAGGCTTTGAATAGGTGGGAGATGTGTGCACAGCCTAAGGTGGTTGTGAAAATCGAAAGTGAAGAAGATATGCTAGCTTTGCAAGAAAGGGCTAAATCACTGAAGTTACCCACCCATATCACAATTGATGCTGGGAGAACACAGATTGCACCAAATTCAAGAACTGTGATGGCAATTCTTGGACCTGTTGAAGTGGTAGATGATGTAACAGGTGGACTGAAACTGCTATAG 543 0.4254 MELTWLSAIIVGAGYLALGYFIGSKYPPRFLFSSKLSIDNTNRNSNTKSKPKESLEIEQLANILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKVLHRAPKALNRWEMCAQPKVVVKIESEEDMLALQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01034 180 CDD PTH2 67 180 IPR002833 GO:0004045
Aip03g01034 180 TIGRFAM arch_pth2: peptidyl-tRNA hydrolase 68 180 IPR002833 GO:0004045
Aip03g01034 180 PANTHER PEPTIDYL-TRNA HYDROLASE 2 3 180 IPR002833 GO:0004045
Aip03g01034 180 SUPERFAMILY Peptidyl-tRNA hydrolase II 65 180 IPR023476 -
Aip03g01034 180 PANTHER OSJNBA0060D06.11 PROTEIN 3 180 - -
Aip03g01034 180 Gene3D Bit1 65 180 IPR023476 -
Aip03g01034 180 Pfam Peptidyl-tRNA hydrolase PTH2 67 180 IPR002833 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01034 Aip-Chr3 10003657 10006774 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01034 K04794 - gmx:100527794 308.531