Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01031 ATGGTCCCACCGGCGGTGCAATCGCCGAATCCACAACTAACCCAGCAGTTCTTAAGCTCTGTCCTCTCACAGCGTGGCCCCGCCGCCCTTCCTTACTCCGAAGACACAAAGTGGCTGATCCGGCAGCACCTCGTCGCCGTCACCACCACGTACCCCTCCCTTGAGCCTAAAACCGCCACCTTCACACACAACGACGGCCGCTCCGTCAATCTCCTCCAAGCCGACGGCACAATCCCGATGTCGTTTCAGGGCGTCACTTACAACATCCCCGTTCTCATCTGGCTCATGGAATCTTACCCTCGCCACGCGCCCTGCGTCTACGTTAACCCCACGCGCGACATGATCATCAAGCGCCCCCACCCTCACGTTAATCCCTCTGGCCTCGTCTCCGTCCCTTATTTGCAGAATTGGGTTTACCCTAGCTCCAATCTCGTCGATCTCGTTCGCGATTTGGGTGTTATCTTTGGCCGCGATCCTCCTCTTTATTCCCAGCGGAGGAACCCTCAACCTCCGCCACCTCAAAACCTAAATCCCAATTCAAATTTCGGATCTTTATCGAGTAATTCGGGGAATTCCCAATCTGGTTATGTCCAGCATCATCAGCATCACCAGCACCCTGCTCCTGCTTCTCCTGCGAGGAATAATTATCCTCCATCACCTTATGGAAGCTTTGGTGGTGGTTCTTCTAGGGTTCAGAATTTGCCCCATACTGAGGATCCAACTGAGGTTTATAAGAGGAATGCGGTTAATAAGATTGTGGAAATGGTTCATGGTGATGTTACTGCTTTGAGGAAGACCAGGGAGGCTGAGATGGAGGGTTTGTTTAGCTTGCAGGGTGTGTTGAAGCAGAGGGAGGAGGTTCTCAATAAGGGTTTGAAGGAGATGCAGGAGGAGATGGAGGGTTTGGAGCAGCAGTTGCAGATGGTTTTGATGAACACTGATATGCTAGATTGCACTGCTTCGGATTTGGCTATTGAGGACACACTTTATGCATTGGATAAGGCTATTCAGGTTGGTTCCGTGCCTTTCGATCAGTACTTGAGGAGCGTGAGGGCGCTGTCGAGAGAGCAGTTCTTTCACCGGGCGACAGCTGCAAAAGTTAGAGCTGCTCAGTTGCAGGCTCAGGTTGCTAATATGGCTGCTAGGACACACCATTATGGCAGTTGA 1167 0.521 MVPPAVQSPNPQLTQQFLSSVLSQRGPAALPYSEDTKWLIRQHLVAVTTTYPSLEPKTATFTHNDGRSVNLLQADGTIPMSFQGVTYNIPVLIWLMESYPRHAPCVYVNPTRDMIIKRPHPHVNPSGLVSVPYLQNWVYPSSNLVDLVRDLGVIFGRDPPLYSQRRNPQPPPPQNLNPNSNFGSLSSNSGNSQSGYVQHHQHHQHPAPASPARNNYPPSPYGSFGGGSSRVQNLPHTEDPTEVYKRNAVNKIVEMVHGDVTALRKTREAEMEGLFSLQGVLKQREEVLNKGLKEMQEEMEGLEQQLQMVLMNTDMLDCTASDLAIEDTLYALDKAIQVGSVPFDQYLRSVRALSREQFFHRATAAKVRAAQLQAQVANMAARTHHYGS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01031 388 Pfam Vps23 core domain 314 366 IPR017916 -
Aip03g01031 388 MobiDBLite consensus disorder prediction 178 200 - -
Aip03g01031 388 PANTHER PROTEIN ELC 208 317 - -
Aip03g01031 388 PANTHER PROTEIN ELC 315 383 - -
Aip03g01031 388 Pfam UEV domain 41 161 IPR008883 GO:0015031|GO:0036211
Aip03g01031 388 Gene3D Ubiquitin Conjugating Enzyme 5 162 IPR016135 -
Aip03g01031 388 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 8 205 - -
Aip03g01031 388 ProSiteProfiles Steadiness box (SB) domain profile. 309 377 IPR017916 -
Aip03g01031 388 Coils Coil 285 312 - -
Aip03g01031 388 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 315 383 - -
Aip03g01031 388 SUPERFAMILY UBC-like 27 161 IPR016135 -
Aip03g01031 388 SUPERFAMILY Endosomal sorting complex assembly domain 313 369 IPR037202 -
Aip03g01031 388 MobiDBLite consensus disorder prediction 160 241 - -
Aip03g01031 388 MobiDBLite consensus disorder prediction 221 236 - -
Aip03g01031 388 Gene3D - 313 370 - -
Aip03g01031 388 PANTHER PROTEIN ELC 8 205 - -
Aip03g01031 388 ProSiteProfiles UEV domain profile. 21 165 IPR008883 GO:0015031|GO:0036211
Aip03g01031 388 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 208 317 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01031 K12183 - gmx:100798165 518.464