Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01021 ATGTCGGCAACAGGTTGTTACAAGTGCGGCAGACCAGGCCACTGGTCTCGCGACTGCCCTTCTTCTGCTCCCGACCAAAACCCCCATTCCTCCGCCGATCGCAATCCTCCCCCTCCTCGTCCTCCTCCTCCTCCTTCTTCCTCCAAGCCTTATTCCGGTGGCGGAGCCAGATTTTCCGCCGGCAGTTCCAAATCCGCGGAGAAGCCTAAGAAGGTCCCCAGATCGAGGCCTAAGCTCACGCCGGATCTCCTCCTCTCCGACGACGGCCTCGGTTACGTCCTTCGCTACTTCCCTCGCGAGTTCAAATACCGCGGTCGCGGCCACGAGGTTCAGGATTTGGGGAATTTACTTCGGATGTACACAGAATGGCACTCTCGCTTGATACCTTATTACTCTTTTGATGAATTCGTTCTCAAAGTTGAGAAAGTTGCTGCTACTAAGCGCGTCAAGATGTGCCTTAGAGATTTGAGAGAAAGAGTTGCAAATGGTGGAGATCCAACCAAATTAAATGAAACACCTGTCGGGCAAGAGATTCCGGCTGAAGAACAAGTCAATGGGGAAGCAAATCATGAAGAGCGAGATTTGTTTTCAGAACCCCAAAATGTTAATGACATGCAAGAGGATATGATTGAGGAGTTTTTCAATACAGCTACTGAAGAACCATCTCAATCAATGCAGAACGAGCCTGATGCCAACACAGTGTCCAAAAGCATTGCAACTGAAGAGACATCAAATGTAATCCAAGATAAGGAAGCCAGCATGTCTGGCAAAGATGAGATAACAGAAGAGCAGAGAGCACGAATGGAAGAAAATAGGTTGAAGGCACTCCAAAGGCGTGCTGCTCGAGCCACCGCCATATCACAGGCCTCTTGA 873 0.4994 MSATGCYKCGRPGHWSRDCPSSAPDQNPHSSADRNPPPPRPPPPPSSSKPYSGGGARFSAGSSKSAEKPKKVPRSRPKLTPDLLLSDDGLGYVLRYFPREFKYRGRGHEVQDLGNLLRMYTEWHSRLIPYYSFDEFVLKVEKVAATKRVKMCLRDLRERVANGGDPTKLNETPVGQEIPAEEQVNGEANHEERDLFSEPQNVNDMQEDMIEEFFNTATEEPSQSMQNEPDANTVSKSIATEETSNVIQDKEASMSGKDEITEEQRARMEENRLKALQRRAARATAISQAS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01021 290 MobiDBLite consensus disorder prediction 31 49 - -
Aip03g01021 290 Coils Coil 266 286 - -
Aip03g01021 290 MobiDBLite consensus disorder prediction 239 265 - -
Aip03g01021 290 Pfam Replication Fork Protection Component Swi3 78 159 IPR012923 GO:0005634|GO:0006974|GO:0048478
Aip03g01021 290 SUPERFAMILY Retrovirus zinc finger-like domains 4 27 IPR036875 GO:0003676|GO:0008270
Aip03g01021 290 Pfam Zinc knuckle 5 21 IPR001878 GO:0003676|GO:0008270
Aip03g01021 290 Gene3D - 2 78 - -
Aip03g01021 290 PANTHER TIMELESS INTERACTING-RELATED 1 288 IPR040038 GO:0000076
Aip03g01021 290 PANTHER TIMELESS-INTERACTING PROTEIN 1 288 - -
Aip03g01021 290 ProSiteProfiles Zinc finger CCHC-type profile. 6 21 IPR001878 GO:0003676|GO:0008270
Aip03g01021 290 MobiDBLite consensus disorder prediction 1 82 - -
Aip03g01021 290 SMART c2hcfinal6 5 21 IPR001878 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01021 K10904 - gmx:100799216 348.977