Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01016 ATGGCTCCCGGGCGTCGACGCGGAGCGAACAAGGCGAAGGCGAACGGACACTTGAGGTTAGGCGATCTCGTCCTCGCTAAGGTCAAGGGCTTCCCTGCTTGGCCTGCCAAGATAAGCAGGCCTGAAGATTGGCAGAAGCCCCCTGATCCAAAGAAATATTTTGTTCAATTTTTCGGTACTAAAGAAATAGCTTTTGTTGCCCCTGCAGATATTCAGACTTTTACCAGTGAGTCTAAAAATAAGTTGTCTGCACGGGGTCAAGGCAAGACTAAGTACTTTACTCAAGCTGTGAAGGAAATCTGCGCAGCATTTGATGAAATACAGAGACAGAAGCCTAGTGGTTTGACAGATGATACTGATAACTCTAATGTTGGGTCAGAGGCTCCTTCCGTTGATGGAGGAGTGGGTAACATAGCAGACACTAATGATGCTGCGGTATCAAACAGTGAGAAAGATAGCAATGCTTGCTCTACTTTTGAGAAGTCTGCTCAATTAATTGGAGAACATGAAAGGCAAGATGAGAAGCTGTCTGTACCTGACCTTGAAAGTTCTTCACCTGTGGTAAAAAATAAGTTATCTGTTAGTCCAGTTATAAAGAATGCTAACAAATCTATTGCTGCAAAGAATGCTGGTGTTTTTAGACAAGAAGAAGGTGTGCATAATCTTTTGACAAATGGAAACAAGCCTAGAAAGCTTGGTACCGACTCAAAAAGAAATGATGCTGCAGATGATCGAAATCAAAATGGTGGATCTTTTGCTGGGTCATTTTCAATGAAAGGAGACTCTACTGAGGGTGCTAATCTTTCCAGATCTGGAGAGACATTGAAAAGTGGGAAAAAAAGGAAAAATTCATTTTCTGTTAAACCAGATTCTCTTGATATTCTTCATTCAGACTCAAAGGATCATACTGGAACAAAAAATAAGACCTTATTAAAAGTTAAAAGAAGCCTGGATTCTGAGGAGGCTGATTGCAAAGATTCTGGGAAGCAAAAGAAGATCCAAATACATGCAAAGAATACCAAGAAGCTTAAGCGCATGGATGCCAAAGATGATAGAAGCACTTCTCCTGGTTCTACTGTTGAAGAAAAAGTTTCTAAAAAGCCAGAGTTGAAAAGGTCCATATCAAATTTGAAAACGGAAAAAAGCATGCCATCAAGGAGTCACATTGGTGTAGGTTCTGATGATTCTGGCTCTGAGGCACTACCAGGGACCAAAGTTCACAGCCATGTACGACAAGTTGTCTCTGATTCTGGTAGCATTGCTTCTGATGAGAAGATAGAGAAGAGTTCTCTTAGACTGAAGGCTGATGCAAATAATGTCATGGTAAAACCAGGACCGCGGAAACGCAGAGCTGTTCGCCTCTGTGACGATGACGATGAGGATGAACCTAAAACTCCTATTCATGGAGGAGCTGTAAAAAGTATTAAGTCACCATCTTTTGTTCCGGAGGTCTTGAAGAGTAACAAGGCACAACCAGAGAAATCTGATCATGCTCAGCCACTTCACAAAAATTTTAGTGAAGTTGAGCATATCCCTTCGAAAGAAGCATCTTCTCAGTTAAATAATGATATCTCATCTTCTAAGCAGCCTGGGAAAGAGAAAGCTGATGAAATTATTCCTGTACATAATAGTCCTGAAAAATTCGATCCAAAGCAAATTCCTTCAAAGGTGGCAAAATTGCGCACTGGGTCTCCAGTAAAATCACCTCAGTCTGTTCCTGCAGCAAAGTCAACTGCTGAGCAACATAAATCTTCCAAACCTTCACTTAAAGTTTCCAGTAATGCTACTGAAAAGAAGGCTGCTCATGGGTTTTCAAAGTCTTCTAATAACATAAGTACTTCTCAGAATCAGGCTGCATCTCATAAAAAGAAGCTTGGATCTTCAATAGAAATTTCTAAAACTACTCCAAAAAGATTGCAGCAGGATGCTGAAGTTCCTGCGGCAACAGGTGGTTTAAAGGAGGCTGATGCTTTTCATCGTTTGGATGTAAGCATGGAAGAAAAAAGCAGTTTATATATTGGTTCTGGGACTCCAGAAGCTGCTAAAAGTATGAAGCATCTGATTGCGGTTGCTCAGGCGAAAAGAAGACAAGCTCATTCTCAAAGTTTTCCTCTTAGCATTCACAATATTCAAGAAGGGACTCCTAGCCCATCCACAGTTCAGCCATTTCTGCCTGCCTCAGGCCATGTTACACAGGCAGATGTGCAGGCAGTTTATGAGAATCCAACATTGGCATCTCCATCAACCAATGATCATCTCTCGGCTTCTCAAAATCAACCTGATACTGAGGAAATCGAGGACGTAAGAGTTGGTTCAGCACAAAGGGGTCCAGGGGGTTCGCTTAGTGGAGGCACTGAGGCTGCTGTTGCTCGTGATGCTTTTGAAGGAATGATTGAAACATTGTCAAGAACAAAGGACAGTATTGGGCGTGCAACTCGCCTTGCCATTGACTGTGCTAAGTATGGCATTGCCAATGAGGTTGTTGAACTTCTCATCCGAAAGCTGGAAAGTGAAACTAGTTTTCATCGCAAGGTGGATTTGTTCTTTCTTGTGGACTCCATCACCCAGTGCTCGCATAATCAGAAAGGCATTGCTGGAGCCTCCTACATCCCTATAGTTCAAGCAGCATTGCCACGCCTTCTTGGTGCTGCTGCTCCCCCTGGGGCTAATGCGCGTGAGAATCGTCGTCAGTGTCTGAAGGTTCTAAGGCTGTGGCTTGAGAGGAAAATTTTGCCTGAATCAGTTCTTCGCCGTCACATGGATGAAATTGGAGTTTCAAATGATGATATAACAGTTAGCCTTTCCCTCAGGCGTCCATCTAGAGCTGAGCGGTCAGTGGATGACCCAATCAGAGAAATGGAAGGCATGCTTGTTGATGAATATGGCAGTAATGCTACATTTCAGCTGCCTGGCTTTTTATCTTGCCAACCATTTGATGACGACGAGGAAGATGATGATTTACCGGTTAATTCAAGTAAGGATACATATGATGCATCTCCAGCACATCTAACGCCCACCCTTGGGGAATCGGAAACTTCTACTGTTACCCCAAATGACAAGCGCCATTGTATCTTGGAGGATGTGGATGGCGAACTAGAAATGGAAGATGTTTCAGGCCACCTGAAGGACGAAAGGACTGAATTTCATAATAGTTCTGATGAAGTAGATTTGCAACCCCAAGGATCAGATAGGAACTTGGATCTTACTTCAAACATGTCAGCAGAGATACCCATTTCTGTGGAGGGTTCTCCGCCATTACCACCTGGTTCACCTCCTCCACCCCCACCTTTGCCTTCTTCACCTCCACCACCACCTCCTCCATCATCTCCATCTCCACCCCCACCTCCGCCACCTCCAATGTTGCAACCCCCACCTCCTCCTTTACCACCCTCGTGCCCAACGGTGCCATTGGTTCCACAATCATCTGGAGTTGCTCGCCCTTCGCACCTCTCCCAGTCAATAAGGCCACCTCAGCCATCACATCAGTCGTCTCCGCAGTTAGGTTATCATCAGAATGTGCCTCATAACTATAGTGCCACAACAAGTGGTAATCAGTTTGTTCAAATGGCTGGGAATGCTTTTCCTGGAGGTCACGGTAATGCAGTTGCAAAGAATGAAATATTCCCACAAGCAGCTGCTTTTGCACCAACAGCAGCCTGCAGCACCCAGGAACCACCTTCTGGTTTTAACCCTTCAAGGCAATTAGAATATGGACAAAATGATATGTATGCAAATGTGCAAGTTCCCCAAGCCAACCATCAATTTCAACAGAGTAATCTACCGTTTGCTCAAAGACCAGGGCATCCTGCCCCACCCCAAAGTTCTTCAAGTCAGTACTCTTTTCCAAACCCTACAGTTCAGCAGCATCCTCCACATTCATTCCATCCACCTTTCCCTTTGCCATCCATTCCAGATGGCCGGAGGCAATTTGTTGCTGATGACCAATGGAGAATGTCGTCAAGTGAATTTAAAACAAACAATCAACACGGTGTTTGGAGAGGGCAAAATCCTTCATGCTCTGGTCCACCCTTTGGGCAAGAAGGTCATTTCCGGCCACCAGTTGAAAGACCACCAGTAAGCAACATAGGCTTCCAGCATGCAATGCCAAATAACATACCTGCTGCTCCACCAACATCAGGACATGGTATTCCCCAGATGTTGCCTTGTAGGCCTGACATGCCTGCTCTGAATTGTTGGAGACCGACTTGA 4209 0.4448 MAPGRRRGANKAKANGHLRLGDLVLAKVKGFPAWPAKISRPEDWQKPPDPKKYFVQFFGTKEIAFVAPADIQTFTSESKNKLSARGQGKTKYFTQAVKEICAAFDEIQRQKPSGLTDDTDNSNVGSEAPSVDGGVGNIADTNDAAVSNSEKDSNACSTFEKSAQLIGEHERQDEKLSVPDLESSSPVVKNKLSVSPVIKNANKSIAAKNAGVFRQEEGVHNLLTNGNKPRKLGTDSKRNDAADDRNQNGGSFAGSFSMKGDSTEGANLSRSGETLKSGKKRKNSFSVKPDSLDILHSDSKDHTGTKNKTLLKVKRSLDSEEADCKDSGKQKKIQIHAKNTKKLKRMDAKDDRSTSPGSTVEEKVSKKPELKRSISNLKTEKSMPSRSHIGVGSDDSGSEALPGTKVHSHVRQVVSDSGSIASDEKIEKSSLRLKADANNVMVKPGPRKRRAVRLCDDDDEDEPKTPIHGGAVKSIKSPSFVPEVLKSNKAQPEKSDHAQPLHKNFSEVEHIPSKEASSQLNNDISSSKQPGKEKADEIIPVHNSPEKFDPKQIPSKVAKLRTGSPVKSPQSVPAAKSTAEQHKSSKPSLKVSSNATEKKAAHGFSKSSNNISTSQNQAASHKKKLGSSIEISKTTPKRLQQDAEVPAATGGLKEADAFHRLDVSMEEKSSLYIGSGTPEAAKSMKHLIAVAQAKRRQAHSQSFPLSIHNIQEGTPSPSTVQPFLPASGHVTQADVQAVYENPTLASPSTNDHLSASQNQPDTEEIEDVRVGSAQRGPGGSLSGGTEAAVARDAFEGMIETLSRTKDSIGRATRLAIDCAKYGIANEVVELLIRKLESETSFHRKVDLFFLVDSITQCSHNQKGIAGASYIPIVQAALPRLLGAAAPPGANARENRRQCLKVLRLWLERKILPESVLRRHMDEIGVSNDDITVSLSLRRPSRAERSVDDPIREMEGMLVDEYGSNATFQLPGFLSCQPFDDDEEDDDLPVNSSKDTYDASPAHLTPTLGESETSTVTPNDKRHCILEDVDGELEMEDVSGHLKDERTEFHNSSDEVDLQPQGSDRNLDLTSNMSAEIPISVEGSPPLPPGSPPPPPPLPSSPPPPPPPSSPSPPPPPPPPMLQPPPPPLPPSCPTVPLVPQSSGVARPSHLSQSIRPPQPSHQSSPQLGYHQNVPHNYSATTSGNQFVQMAGNAFPGGHGNAVAKNEIFPQAAAFAPTAACSTQEPPSGFNPSRQLEYGQNDMYANVQVPQANHQFQQSNLPFAQRPGHPAPPQSSSSQYSFPNPTVQQHPPHSFHPPFPLPSIPDGRRQFVADDQWRMSSSEFKTNNQHGVWRGQNPSCSGPPFGQEGHFRPPVERPPVSNIGFQHAMPNNIPAAPPTSGHGIPQMLPCRPDMPALNCWRPT 1402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01016 1402 MobiDBLite consensus disorder prediction 743 761 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 245 273 - -
Aip03g01016 1402 SUPERFAMILY Tudor/PWWP/MBT 13 110 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 1260 1307 - -
Aip03g01016 1402 PANTHER PROTEIN HUA2-LIKE 1 1 1402 - -
Aip03g01016 1402 SMART 558neu5 793 924 IPR006569 -
Aip03g01016 1402 Gene3D - 785 929 IPR008942 -
Aip03g01016 1402 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 743 786 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 111 137 - -
Aip03g01016 1402 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1402 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 975 1021 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 489 510 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 1260 1288 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 340 376 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 114 128 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 274 333 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 1144 1180 - -
Aip03g01016 1402 Pfam PWWP domain 21 104 IPR000313 -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 449 467 - -
Aip03g01016 1402 Pfam CID domain 793 917 IPR006569 -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 1046 1180 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 511 528 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 220 651 - -
Aip03g01016 1402 CDD HDGF_related 18 103 IPR035496 -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 564 639 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 1289 1303 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 992 1019 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 1081 1136 - -
Aip03g01016 1402 ProSiteProfiles CID domain profile. 786 927 IPR006569 -
Aip03g01016 1402 Gene3D - 10 113 - -
Aip03g01016 1402 SMART PWWP_4 18 75 IPR000313 -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 1053 1077 - -
Aip03g01016 1402 MobiDBLite consensus disorder prediction 529 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01016 Aip-Chr3 9723359 9736306 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01016 - - gmx:100800279 1354.35