Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01013 ATGGCGACTCTGCGTTTCACTGACTGCTCCAACCTCACCTCCACCTTCTTCAGGCCTTCCTTACCCTCTCTCTCCGCCGCAAAGTCTCGCCATTCCCAAAACCCTCAGAATCGGAACACCAGCACCAGCAGCTGCACCTTCGTTCCCAGAGCGTCTCTTCAGCCGCACCAGGACGATCAATTCTCTCTCTCCCGGAGACGCTTCATCGCCGACACTGCCGCCGTCTCGCTCTCGATTCCTCAGCTCGTTGGATTTGAACAGGCTGCGAGGTCGGAGGAAGCGCTGTCGGAGTGGGAGAGAGTTTACCTCCCTATCGATCCCGGTGTCGTGCTCCTTGACATTGCGTTTGTTCCCGATGATCCCAACCACGGTTTCCTTTTGGGGACTAGGCAAACCATTATGGAGACAAAAGATGGTGGAAACACTTGGGCTCCCCGTTCGATACCCTCTGCAGAGGATGAAGATTTTAACTATAGATTTAATTCCATCAGCTTCAAAGGGAAGGAAGGGTGGATAGTTGGAAAGCCTGCAATTCTATTATATACTTCTGATGCTGGAGAAAGTTGGGAAAGGATACCACTTAGTGCTCAACTTCCAGGGGATATGGTATATATAAAGGCAACCGGTGAAAAGAGTGCAGAGATGGTGACTGACGAAGGTGCAATCTACGTTACATCAAACAGAGGCTACAATTGGAAGGCTGCTGTTCAGGAAACGGTGTCAGCTACTCTTAATCGAACAGTCTCTAGTGGTATTAGTGGTGCAAGTTATTACACCGGGACGTTCAATACTGTCAATCGCTCTCCAGATGGGAGGTATGTTGCAGTCTCAAGTCGTGGCAACTTCTATCTAACATGGGAACCTGGTCAGCCATTCTGGCAGCCACATAATAGAGCAGTTGCCAGAAGAATCCAGAACATGGGATGGAGAGCTGATGGTGGTCTGTGGCTTCTTGTTCGTGGTGGTGGCCTTTATCTCAGCAAGGGCACAGGGTTGACCGAAGAATTTGAGGAGGTTCCCGTTCAAAGCCGAGGTTTTGGCATTCTTGATGTGGGGTATCGATCACAGGAGGAGGCTTGGGCAGCAGGTGGAAGTGGTATTCTGTTGAGAACTACTAATGGTGGCAAGTCATGGATCCGTGACAAAGCTGCTGACAACATTGCTGCAAATTTATACTCAGTGAAGTTCCTTGATGACAAGAAGGGGTTTGTATTGGGGAATGATGGAGTCTTGCTTCGCTACCTTGGATGA 1251 0.498 MATLRFTDCSNLTSTFFRPSLPSLSAAKSRHSQNPQNRNTSTSSCTFVPRASLQPHQDDQFSLSRRRFIADTAAVSLSIPQLVGFEQAARSEEALSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTIMETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSQEEAWAAGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFLDDKKGFVLGNDGVLLRYLG 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01013 416 Pfam Photosynthesis system II assembly factor YCF48 93 414 IPR028203 -
Aip03g01013 416 Gene3D - 158 383 IPR015943 GO:0005515
Aip03g01013 416 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 57 416 - -
Aip03g01013 416 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 97 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01013 Aip-Chr3 9707255 9711372 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01013 - - ming:122064600 696.041